Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal16g0979 | ATGTCTCAAATAGTTTTCGATTTTGATGGAGAAATAAGTTATTATGAGTTAGTTATGAATTACAAAGAGTGTAAACACAATCATGGTGTGCATTATGGTTTTGTTCTTCTTGATGGTTGCGTCGAGTTTATAAGTGGAGGTCGACGAAATGAAGATGATGAAGTTGGAGATGCTTTGATTTGTGCTAACTGCAACTGTCACCGCAACTTTCACCGAAGAGAAGTCACAATTAGACCAATACCTCAACCTCGTGAACCTCACAACAACAGTCAATAA | 276 | 0.3732 | MSQIVFDFDGEISYYELVMNYKECKHNHGVHYGFVLLDGCVEFISGGRRNEDDEVGDALICANCNCHRNFHRREVTIRPIPQPREPHNNSQ | 91 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal16g0979 | 91 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 19 | 81 | - | - | |
Lal16g0979 | 91 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 19 | 81 | - | - | |
Lal16g0979 | 91 | Pfam | ZF-HD protein dimerisation region | 19 | 75 | IPR006456 | - | |
Lal16g0979 | 91 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 20 | 75 | IPR006456 | - | |
Lal16g0979 | 91 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 21 | 74 | IPR006456 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal16g0979 | Lal-Chr16 | 6516798 | 6517252 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal16g0979 | 21 | 75 | ZF-HD Transcription Factor Family | AT3G50890 | 52.727 | 7.54e-14 | 62.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | zf-HD | Lal16g0979 | ZF-HD_dimer | 6.4e-19 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal16g0979 | - | - | lang:109357419 | 70.8626 |