Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0970 ATGGTTGAGCAAAATCATTTACCAAAGGGAAGTAATACAAATTGGATTAAGGCTCTTATGAATAGCAGCTTTGGCCATTGTGATGATCACCATGACCTAAAGTCCAATGAGAAGAATGTGTTTTGTATAGACTGTGAAGTTAGAATGTGTAGGCACTGTAAAGAAGCTCATTCTCTTCATAGAAGTTTTCAGATATACAAGTATTCCTATCAGGATGTGTTTCGCCATTCCGAGCTGCAGAAATATTTTGATTGCTCGAAAATTCAGACTTACATATCCAATAATGAAAGGATTGTGCATCTCAAACCTCGGCCTTCAATAACTAAATCTAAAGCTGCTGATCTAAGCCCTGAGTCTAAATCCAAAGAAACCAACTTGCCGATAAGACCAAAGGCGGGTGGTACATGTAAAGAATGTGGAAAACACTTACAAGATGAGCGTAATCGCTTCTGCTCCATTACATGCAAGATCTTATTGCATCCAATGGAGCCTCAAAATCACTATTCACAAAGGATAAGTTCAGAGTGTACCAAAGCTCCAAAACCTGACCCTACTGACTTTACTTTGAATGATAACCATAATTCCGAACCAGAGTCATCTATATCTGAAGCTCAGCCATGTGGATTGATTGAAGTTGTGAATTTCAGAAAGCGTCCACGTAAAGCCACCCCTCTTCATAGACCTCTTTTTGTTTTCACATCTTAA 705 0.3872 MVEQNHLPKGSNTNWIKALMNSSFGHCDDHHDLKSNEKNVFCIDCEVRMCRHCKEAHSLHRSFQIYKYSYQDVFRHSELQKYFDCSKIQTYISNNERIVHLKPRPSITKSKAADLSPESKSKETNLPIRPKAGGTCKECGKHLQDERNRFCSITCKILLHPMEPQNHYSQRISSECTKAPKPDPTDFTLNDNHNSEPESSISEAQPCGLIEVVNFRKRPRKATPLHRPLFVFTS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0970 234 MobiDBLite consensus disorder prediction 187 202 - -
Lal16g0970 234 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Lal16g0970 234 MobiDBLite consensus disorder prediction 104 127 - -
Lal16g0970 234 MobiDBLite consensus disorder prediction 171 203 - -
Lal16g0970 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 205 - -
Lal16g0970 234 Pfam PLATZ transcription factor 67 157 IPR006734 -
Lal16g0970 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0970 Lal-Chr16 6455093 6458067 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lal16g0970 PLATZ 3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0970 - - gmx:100815813 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0970 16 6455093 6458067 Lal16g0970 16 6455093 6458067 ECH
Lal16g0970 16 6455093 6458067 Lal23g0672 23 9391036 9393242 LSH