Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0964 ATGGATACACCACTGATACCACTTTCTCTCTCCACCGTGCAAAACCACTCTGACTCAACAGAATCCTCTCCTAACTATCACATTGTTAATAACCAAACATGGCCAGATAATCACGACCCTCTCCCCAATGTCCCTAACGCCAAGCTCCGCCTCATGTGCAGCTACGCCGGCCATATCATGCCACGTCCTCACGACAAGTCCCTCTCCTACGTCGGCGGCGAAACCCGCATCGTCGCCGTCGACCGTCACACTTCTCTCAAAGACCTATGTTTACGTTTATCACATTCTCTTCTCCACGGAAGAGCTTTCACTCTCAAGTACCAACTACCAAACGAAGAACTTGATAACCTAATAACTGTCACAACTGATGAGGATCTTGGTAACATGGTTGAAGAGCACGATCGTTTGGCTTCTTCGCGTCTTAGGGTTTTCTTGTTCTTCAACAAACCTGACACTACGGTTTCGATGTGTTCACTTATGGAGGATGTGAAATCAGATACGTTGTTTGTTGATGCTCTTAATAACTGTGGGATTCTTCAACGTGGTGTTTCTGATTCTGCTGCAGTGGATCAATGCCTGGTTAACATTGATGAGGTTCGTGAAACCAATGATTTGAAGACTCGGGTAATTGTTGAGGCTACTCCCATCACTGTGGTGGATAGTACAAAGGAGGTTAAGGAAGAGTTGCATTCAGTGGAGAATAATTCATCTTCAATGGCTAATTTGCCTCCAATAACAGTTCATGGTTGTGACAGGATTCAGGAACAGTTTGCACAAATGAGTTTTGGTACAAAAGGGGTGAGGCATAATTTGCTGGATCATGGTTATGCTATATCTTCTGCTGCTACTCCTATGAATGCAATTCCTGAAGCTGTGAAGAATATAGTTATTAATAATAATAATAATAATAATAATATGAATCTGGTTAATGTGTGTGATGATGATAGATCAGATCATAATGAAGGACTTGTTGGTGTATATAGAAAGCCCCCTTTACCATTGCAGCTTGTGCAGCCTAGAACTTTCAATGCAGCTTGTGCTGGTTTTGGTTTGGCTTCTCCAGATTCAGTTGCAAGTGAGAGCAGCATTGCATCAGAAAATTCTTTGTCAAAGACTGTTTACTATCATCAAGAACAAGTCCAACCTCCACAAGTGGACAACAAAGCTCTTCCTATGCCAAATATCAAGACTGAAATATCTGAACACACCCCTACACTACAAAGGGAACAAGTTCAGGTTCAAGATTCATGTTACACTTTACCTCAACAACAATTGGATCAATCTCAGCAACTCCAACATCAACAACAACAACAACAGCAACATCAACAATTTGTCTACATTCACCACCCTGCAGCAACAGGACAAGTGCCAACAATATCATCATATTACCCACTTTATCCCCCACCATCACAACAACAACTTCACCATGCAATTAGCCAGCAACAATATCCACTTTATGTAATGCCTGTAGGACCTAAACAACATGTAATACCCCAAGGTTCTGCAGCCTCAGCAGTATATAAGGATGGTGCTCCACCAATTTATCCTACTAACTTAGCTACCCCAACTATATCTGAAGTGGGTCCAAATGTTTACAAAGCCACTATGGCATCAAATCCTGCATTTGTTCATATACCTTCTAACCAATTTCAGCAACAGTATGTGACTTTGCCTCAAAATATCCATCATCAAACACACCCTATTGCAATGGGTCCTTCTGCCACTACTAATTATGGTTATGATCAATATGATGGAACCATGCAAGACCAAGTATACTATACTCAACAGCCCCCCCAATACCAATCCATGACCCTAGCTGCTGCAGCTGCTGCAGCACTATCAGATGTTTCAGAACAATTTCCTATAGACAACATTCAGTATCCAAACAGAGATTCACAGCCAGTATAG 1908 0.4198 MDTPLIPLSLSTVQNHSDSTESSPNYHIVNNQTWPDNHDPLPNVPNAKLRLMCSYAGHIMPRPHDKSLSYVGGETRIVAVDRHTSLKDLCLRLSHSLLHGRAFTLKYQLPNEELDNLITVTTDEDLGNMVEEHDRLASSRLRVFLFFNKPDTTVSMCSLMEDVKSDTLFVDALNNCGILQRGVSDSAAVDQCLVNIDEVRETNDLKTRVIVEATPITVVDSTKEVKEELHSVENNSSSMANLPPITVHGCDRIQEQFAQMSFGTKGVRHNLLDHGYAISSAATPMNAIPEAVKNIVINNNNNNNNMNLVNVCDDDRSDHNEGLVGVYRKPPLPLQLVQPRTFNAACAGFGLASPDSVASESSIASENSLSKTVYYHQEQVQPPQVDNKALPMPNIKTEISEHTPTLQREQVQVQDSCYTLPQQQLDQSQQLQHQQQQQQQHQQFVYIHHPAATGQVPTISSYYPLYPPPSQQQLHHAISQQQYPLYVMPVGPKQHVIPQGSAASAVYKDGAPPIYPTNLATPTISEVGPNVYKATMASNPAFVHIPSNQFQQQYVTLPQNIHHQTHPIAMGPSATTNYGYDQYDGTMQDQVYYTQQPPQYQSMTLAAAAAAALSDVSEQFPIDNIQYPNRDSQPV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0964 635 PANTHER OS05G0427100 PROTEIN-RELATED 1 627 - -
Lal16g0964 635 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 627 - -
Lal16g0964 635 Gene3D - 69 148 - -
Lal16g0964 635 Pfam PB1 domain 64 146 IPR000270 GO:0005515
Lal16g0964 635 SUPERFAMILY CAD & PB1 domains 64 156 - -
Lal16g0964 635 SMART PB1_new 63 146 IPR000270 GO:0005515
Lal16g0964 635 CDD PB1_UP2 52 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0964 Lal-Chr16 6391829 6394451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0964 48 175 MAP Kinase Kinase Kinase AT5G57610 43.284 6.91e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0964 - - var:108343763 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0964 16 6391829 6394451 Lal16g0964 16 6391829 6394451 ECH