Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0951 ATGGGCGGTGGAGGAACACTCGTTGAATTTATTCGTCGCTTCTTTAATCGACAACAACGTTCTTCTTCTTCTTCTTCTTCTACTACTACTACTACTAATTCTCGTTCCGATGAACACGTTTCCAACAAAAACAACAATGCCATTTTAGTCAAAGATTTGCGTTCTCAATTAGCCTCTATTCCTAATCAAGATACTGATCTTACCCCTGACGAAGACTCTTCTTTGAATCATATCAAAGTACCTACGTCTACCCTCTTTGTTCCTCATGCTTCTTCCATGGATTCTCACAAAAAGGGTGCACCAGAAGCAGAATTTTTTACTGAGTATGGAGAGGCAAGTCAATATGAGATCCTAGAAGTCGTCGGAAAAGGAAGTTATGGTGTTGTGGGTTCTGCCATTGACATTCATACTGGTGAGAAGGTTGCAATCAAGAAAATTAATGATGTTTTTGAACATGTATCAGATGCCACACGGATCCTAAGAGAAATTAAACTCCTTCGGTTGCTCAGGCATCCGGATATTGTAGAAATTAAGCATATCATGCTTCCTCCTTCACGGAGAGAGTTCAAGGATATCTATGTTGTGTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATTAAGGCAAATAATGATCTTACTCCTGAGCACCACCAATTTTTCTTGTACCAACTTCTTCGGGGCTTAAAATATATACATACAGCAAATGTGTTTCATCGTGATTTGAAGCCAAAAAATATTCTCGTTAATGCTGATTGCAAACTAAAGATATGTGATTTTGGGCTTGCTCGGGTTTCATTTGATGATGCTCCGTCAGCTATATTCTGGACTTATACCCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCAATGGAAAGCCATTGTTTCGTGGAAAAAATGTGGTGCACCAGTTGGATCTCATGACTGATTTGCTTGGCACTCCTCCCGCTGAGTCCATTGCGAGGATTCGTAATGAGAAAGCTAAAAGGTATCTTAGCAGCATGCGAAAAAAGCAACCAGTTCCATTATCTCAAAAATTTCCAAAAGCAGATCCGCTGGCTCTTTCTATGCTGGAGCGCCTACTTGCGTTTGATCCTAAAGATCGTCCAACAGCTGAGGAGGCATTAGCTGATCCTTACTTCAATGGTCTGTCGAACATTGATTGTGAACCATCCACTCAACCAATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGGAGAGTGAGCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTGGAGTACCATCCTCAGATGCTTCAGGAATATCTTAATGGTGGAGATTTAACCAGTTTTATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAAGAACATTATGGCAAAGGTCAGCGAAGCTCCCCATTGCAGAGACAGCATGCCTCCTTACCTAGTAGAGGGGAAGTCATAGTGGCCCCTATTGAGAGAAAAGTTGAATCATGCATGATATGGTTTGAAGACAATATGAGAAGACCAATAGAAACTCCAGTAGGAGAGGTAGATCAAGGAAAACTCGAGTTTAATTTCACTTATCCCAGAGAGCGAGTTGTTTGTTCCAAGGACTCAACTAGTCAGAACAATTTTGAAAAGCCAAGTGGATCAAATCTTCAGAGTTCCCCAGAGTCTGATGTGACGGATTCTAGAAATGCACAAAATGGACCCTCCAAGACAAACAGCAGCACACATGGCCTGTTGAAGAGTTCCAGCATTAGTGGTTCAAAGTGTATAGATGTAAAGCAAAGTAAAGATCCAGAGACGGCGCCAATTACGGAGATCAACGACGAGGCAGTAGATGAATTAACAGAGAATCTTGCTTCTGTCCATGCTTAG 1887 0.4107 MGGGGTLVEFIRRFFNRQQRSSSSSSSTTTTTNSRSDEHVSNKNNNAILVKDLRSQLASIPNQDTDLTPDEDSSLNHIKVPTSTLFVPHASSMDSHKKGAPEAEFFTEYGEASQYEILEVVGKGSYGVVGSAIDIHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANNDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILVNADCKLKICDFGLARVSFDDAPSAIFWTYTPAIDIWSIGCIFAEMLNGKPLFRGKNVVHQLDLMTDLLGTPPAESIARIRNEKAKRYLSSMRKKQPVPLSQKFPKADPLALSMLERLLAFDPKDRPTAEEALADPYFNGLSNIDCEPSTQPISKLEFEFERRRVSKDDVRELIYREILEYHPQMLQEYLNGGDLTSFMYPSGVDRFKRQFAHLEEHYGKGQRSSPLQRQHASLPSRGEVIVAPIERKVESCMIWFEDNMRRPIETPVGEVDQGKLEFNFTYPRERVVCSKDSTSQNNFEKPSGSNLQSSPESDVTDSRNAQNGPSKTNSSTHGLLKSSSISGSKCIDVKQSKDPETAPITEINDEAVDELTENLASVHA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0951 628 MobiDBLite consensus disorder prediction 539 595 - -
Lal16g0951 628 Gene3D Transferase(Phosphotransferase) domain 1 201 409 - -
Lal16g0951 628 CDD STKc_TDY_MAPK 114 431 - -
Lal16g0951 628 ProSitePatterns Protein kinases ATP-binding region signature. 121 145 IPR017441 GO:0005524
Lal16g0951 628 Gene3D Phosphorylase Kinase; domain 1 131 432 - -
Lal16g0951 628 SMART serkin_6 115 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0951 628 MobiDBLite consensus disorder prediction 18 44 - -
Lal16g0951 628 Pfam Protein kinase domain 115 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0951 628 SUPERFAMILY Protein kinase-like (PK-like) 111 390 IPR011009 -
Lal16g0951 628 ProSitePatterns MAP kinase signature. 150 253 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal16g0951 628 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 79 277 - -
Lal16g0951 628 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 278 483 - -
Lal16g0951 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lal16g0951 628 ProSiteProfiles Protein kinase domain profile. 115 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0951 628 MobiDBLite consensus disorder prediction 539 614 - -
Lal16g0951 628 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 278 483 - -
Lal16g0951 628 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 79 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0951 Lal-Chr16 6312829 6317938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0951 1 624 MAP Kinase Gene Family AT1G73670 60.369 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal16g0951 Pkinase 2.8e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0951 - - gmx:100780831 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0920 15 7038152 7043546 Lal16g0951 16 6312829 6317938 ECH
Lal16g0951 16 6312829 6317938 Lal16g0951 16 6312829 6317938 ECH
Lal16g0951 16 6312829 6317938 Lal15g0920 15 7038152 7043546 LSH