Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0938 ATGTCAACACAGTATGAAAGATTTTCAAAGGATTTTCTAATTGGAGGAGCAGCAGCAGTCATGTCAAAGACTGCAGCGGCACCAATTGAGAGAGTGAAGCTTTTATTACAAAACCAAGGTGAAATGATTAAACGAGGACAACTCAAGAAACCATACTTGGGTGTATCACATACCTTTAAGAGGGTCTTCATGGAAGAGGGTCTGATTGCTTTTTGGAGAGGTCACCAGGCCAATATTATTCGATATTTCCCCACACAGGCCTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGGCATTCCAAAGAGAGAGACGGGTACATTAAGTGGTTTGCTGGAAATTTGGCTTCAGGCAGTGCTGCAGGAGCTACCACTTCACTGCTTTTGTATCATTTAGATTATGCACGCACACGATTGGGAACTGATTCATTGGAGTGCCGTGCCACTGGTCAGCGCCAGTTTAAAGGACTAGCTGACGTATACCGTAAAACCTTATCAAGTGATGGAATTGCTGGTCTGTACAGGGGTTTCAGTGTTTCAATATTGGGAATCACAATGTATCGAGGAATGTACTTCGGGCTCTATGACACCTTGAAGCCTATTGTTTTAGTTGGGCCTTTTGAGGGGAACTTTTTTGCTAGTTTCTTGTTAGGTTGGAGCATTACAAGTTCTGCAGGGGTTTGTGCATACCCTTTTGATACACTGCGCCGAAGAATGATGCTAACATGTGGACAGCCAAACAAATATAATAATGCAATGCATGCATTTCACGAGATCGTTCAACAAGAGGGTTTCTCAGCTCTATTTCGAGGAGTTACTGCAAATATGCTTCTTGGTGTGGCAGGAGCTGGGGTGCTTGCCGGGTATGATCAGCTGAGCCATATTTTATCTAGACATGATCACTATAATGAGACAAATCAAAGAGTTTTGTGA 939 0.4249 MSTQYERFSKDFLIGGAAAVMSKTAAAPIERVKLLLQNQGEMIKRGQLKKPYLGVSHTFKRVFMEEGLIAFWRGHQANIIRYFPTQAFNFAFKGYFKSIFGHSKERDGYIKWFAGNLASGSAAGATTSLLLYHLDYARTRLGTDSLECRATGQRQFKGLADVYRKTLSSDGIAGLYRGFSVSILGITMYRGMYFGLYDTLKPIVLVGPFEGNFFASFLLGWSITSSAGVCAYPFDTLRRRMMLTCGQPNKYNNAMHAFHEIVQQEGFSALFRGVTANMLLGVAGAGVLAGYDQLSHILSRHDHYNETNQRVL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0938 312 Gene3D Mitochondrial carrier domain 9 304 IPR023395 -
Lal16g0938 312 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 308 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal16g0938 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 297 IPR018108 -
Lal16g0938 312 PRINTS Mitochondrial carrier protein signature 11 24 IPR002067 GO:0055085
Lal16g0938 312 PRINTS Mitochondrial carrier protein signature 24 38 IPR002067 GO:0055085
Lal16g0938 312 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085
Lal16g0938 312 PRINTS Mitochondrial carrier protein signature 126 144 IPR002067 GO:0055085
Lal16g0938 312 PRINTS Mitochondrial carrier protein signature 176 194 IPR002067 GO:0055085
Lal16g0938 312 PRINTS Mitochondrial carrier protein signature 220 242 IPR002067 GO:0055085
Lal16g0938 312 PRINTS Adenine nucleotide translocator signature 8 20 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal16g0938 312 PRINTS Adenine nucleotide translocator signature 52 73 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal16g0938 312 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal16g0938 312 PRINTS Adenine nucleotide translocator signature 111 124 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal16g0938 312 PRINTS Adenine nucleotide translocator signature 216 232 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal16g0938 312 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 1 308 - -
Lal16g0938 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 99 IPR018108 -
Lal16g0938 312 SUPERFAMILY Mitochondrial carrier 6 294 IPR023395 -
Lal16g0938 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 203 IPR018108 -
Lal16g0938 312 Pfam Mitochondrial carrier protein 7 102 IPR018108 -
Lal16g0938 312 Pfam Mitochondrial carrier protein 112 203 IPR018108 -
Lal16g0938 312 Pfam Mitochondrial carrier protein 212 300 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0938 Lal-Chr16 6234412 6237996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0938 6 301 Antiporters AT5G17400 76.351 4.56e-167 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0938 K05863 - gmx:100798418 534.643