Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0933 ATGTCTTCTCTCTTAGATGATTGCAGGGAGCACTTGCTAGAAGTTGATGACAACACCACAAAATCGAAGTTCCAGATACGAAATCTGAGCAAAGTTTCTGACTCCGGTGTTTCAATTCTGAAGGGCATAACGGTTGATATACCAAAGGGTGTTGTGGTTGGAATCATAGGACCCAGTGGAAGTGGAAAGTCAACACTTTTGAGAGCATTGAACCGCCTCTGGGAACCACCTTCCTCCGCCGTCTTTCTTGATGGTCACGATATCACTGATCTCGATGTTCTCTCTCTCCGCCGTAAGGTTGGCATGCTCTTTCAGCTCCCTGCTCTTTTTGAAGGCACAGTTGCAGACAATGTGAGGTATGGACCGCAGCTGAGAGGGAAAAAACTAAGCGATGATGAGGTGCGCAAGTTGCTGATAATGGCGGACCTGGATGATTCTTTCCTCGATAAGTCTGGTACTGAGCTCTCTGTGGGTCAAGCTCAGAGAGTTGCACTTGCCAGGACTTTAGCTAATTCACCAGAGGTTTTGTTGCTGGATGAGCCAACTAGTGCATTAGATCCAATATCCACAGAAAACATAGAGGATGCCCTGTTGAAGCTGAACAAGAATCGCGGCATGACAGTGATCATGGTCTCTCATAGCATCAAACAAATCCAGAGGATAGCTGACATTGTGTGCCTTCTTGTTGATGGTGAAATTGTTGAAGTCCTTAAGCCTGATGAACTTTCTGAAGCAAAGCATCCCATGGCACAAAGGTTTCTTGAACTCAGTTCTTAG 777 0.4595 MSSLLDDCREHLLEVDDNTTKSKFQIRNLSKVSDSGVSILKGITVDIPKGVVVGIIGPSGSGKSTLLRALNRLWEPPSSAVFLDGHDITDLDVLSLRRKVGMLFQLPALFEGTVADNVRYGPQLRGKKLSDDEVRKLLIMADLDDSFLDKSGTELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDALLKLNKNRGMTVIMVSHSIKQIQRIADIVCLLVDGEIVEVLKPDELSEAKHPMAQRFLELSS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0933 258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 245 IPR027417 -
Lal16g0933 258 CDD ABC_PstB_phosphate_transporter 24 242 IPR005670 GO:0005315|GO:0016020|GO:0035435
Lal16g0933 258 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 9 258 IPR005670 GO:0005315|GO:0016020|GO:0035435
Lal16g0933 258 Gene3D - 20 257 IPR027417 -
Lal16g0933 258 Pfam ABC transporter 40 183 IPR003439 GO:0005524
Lal16g0933 258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 255 IPR003439 GO:0005524
Lal16g0933 258 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 9 258 - -
Lal16g0933 258 SMART AAA_5 49 232 IPR003593 -
Lal16g0933 258 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0933 Lal-Chr16 6196171 6198869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0933 10 242 Calmodulin-binding Proteins AT2G36910 33.607 1.43e-32 124