Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0929 ATGTTGTCCTACAAGGCCACTCAGGAAGATAGGTCAAGAAATACTGTTCTCCATCCAATAGCTTCAAATAGACACATGACCAAGTCAACTGCAGATGCTTTTGTCTCCAACCATAAATTCTTACGTGAAATCCAGAATAAAGGGGTCGCAAACAAGGAATCAAGTAACCAACATGGAATGATTACAGCACAGCTTTTGCAGAAGCAGAATTTTGATGCTAAATCTGCTAGCCCTCAGGAACAAAGATTATTTTCAATCTACAACCAATCAAAACAAGCCAGTGTTGTTCTCCAATCTAATCTAGCTACTACTACACAGAACATGGTCAATGCAGCCATAAAACCACATCCACATATGGCCTCAGTGTCTCATCTTCCATCTAGAAATTCCATTATTGGCTTAACTGAATTCAGGAATTCTTCTACTAGCCCTAATGCTCAGCTGACTATTTTTTATGCTGGTTCAGTATGTGTTTATGATGACATATCTCCTGAGAAGGCTAATGATATCATGTTGTTGGCTGGAAATGGGTCTACTCCAACTAGGAGCGTGTCAGTTTCCATAGACAAATTGCGGTCACCAATTTCTATGGAGTCCAAAGATGATGGCTTTATTATAAGCCAATTCTCTCCCTCACCCCTTCCAAGCCCTCATTATGTGACTACTCATACTAATTTTCAGAGTGGGAAAGGATCTTGTAGCAACAATGAACTTGGAATAGTGAGGCCGTTGGGATATTTGGCTACCCCTATAAACCATTTGGAGTCTCCTAATGTTGCTTCTGTAGAATCTGCTGCAACAAAAATGGTTCAGCCAGTAAGCCTCCCTCATGCACGTAGAGCACCAATGTCTCGGCTTTTAGAGAATCGCAAAGAAAGATAA 882 0.4082 MLSYKATQEDRSRNTVLHPIASNRHMTKSTADAFVSNHKFLREIQNKGVANKESSNQHGMITAQLLQKQNFDAKSASPQEQRLFSIYNQSKQASVVLQSNLATTTQNMVNAAIKPHPHMASVSHLPSRNSIIGLTEFRNSSTSPNAQLTIFYAGSVCVYDDISPEKANDIMLLAGNGSTPTRSVSVSIDKLRSPISMESKDDGFIISQFSPSPLPSPHYVTTHTNFQSGKGSCSNNELGIVRPLGYLATPINHLESPNVASVESAATKMVQPVSLPHARRAPMSRLLENRKER 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0929 293 MobiDBLite consensus disorder prediction 274 293 - -
Lal16g0929 293 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 2 212 IPR040390 -
Lal16g0929 293 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 211 293 IPR040390 -
Lal16g0929 293 Pfam tify domain 144 175 IPR010399 -
Lal16g0929 293 ProSiteProfiles Tify domain profile. 141 176 IPR010399 -
Lal16g0929 293 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 2 212 - -
Lal16g0929 293 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 211 293 - -
Lal16g0929 293 SMART tify_2 141 176 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0929 Lal-Chr16 6166209 6168500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0929 1 293 Tify Gene Family AT3G17860 35.526 3.48e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal16g0929 tify 6.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0929 K13464 - gmx:100807288 259.225