Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0928 ATGGTGTTCAAGGGAAGATTCTTCTCTTCTTCCAAGAAATCTGATTCAGATGGATCATCCAATAGCCCTAGATCCATTTCCTATAATTCCCCTTCCAGATCCGATAAGAAGAAACTCAAAGATAGCAAGAAGAATAACATCGATGACGCTGCTAAATCAAAATCATCTCCAACTGGTTCATCATCACCGTCACCGTCACCGTCATCGTCGGTGTCGCCGATACTAGCCTCCTCGCTTGGTTTGAATAAGATAAAAACGAGATCGGGACCGTTACCTCAGGAGAGTTTCTTTAGTTTCAGGAACGATAATAACAAAATCGGTGCTAGTAATCTTTCGAAATCTGATGGAAAGAAGGAGGTGGTGGAGAAGCAGAAGAGTAGAGGTTCGATTCGCGAGAGTTTCGGTAGTGATTATAGCGTGTCTCCTGGTACTGGAGCAACTTGTAGTTCAAGGGAAGATAGTCCTAATGTGTTGGCACCATCACCCCTACAAAACGAGGAATCGTCCTCCAACTCAGGGAGACATGAATCTTCGTGGGCCCAGTCTGGAGGCTTAAGAAATTCAGATGCTAGCACCCCAGAGGTAGCATATGATTATGAAAACCCAAAGGAGTCGGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCACCTAGAAAAAGGTTTCCTGCAGACATTAAGAGCTTTTCCCATGAGTTGAATTCCACTGGTGTCCGGCCTTTTCCATTTTGGAAGCCTCGAAGGTTAAATAACGTGGAGGAGATCCTGGATGGCATTCGGGCAAAATTTGATAAAGCAAAGGATGAAGTGAACTCTGATCTGGCAATTTTTGCAGCAGACCTGGTTGGAATTCTTGAAAAAGATGCAGATATTCATCCCGAGTGGCAGGAGACAATCGAAGACTTGCTTATTTTGGCTAGGAGATGTGCTATGACTTCACCCGGGGAATTTTGGCTTCAGTGTGAAGGCACAGTTCAAGAGTTGGATGATAGGCGTCAAGAGCTTCCTCCAGGGATGCTAAAGCAGCTTCACACTCGGATGCTTTTCATTCTCACCAGGTGTACCAGATTATTGCAATTCCACAAGGAAAGTGGCTTAGCTGAGGATGAAGTTGTTTTTAATCTCCGCCAATCCAGAGTCTTGCATTCTGCTGCAAAATGTATTCCTCCAGGTCTGGAAAGAGATGGTAAAAGTTCTAGTGCGGCAAAGGCCTCGAAGGCTTCAGCCAAAAAAGCGTATAGTCAAGAACAACATATCTTGAATTGGAAGAAAGATGTAGTGCAGCCACAAAATCTATTGCTTCCTCCTCATGATGACCCTTCAAAAAACTTGGACTCTCCGCCAATCAGGAATCGAATGTCTTTTTGGAAGAAGTTCCCATCTCCACCAGGTAAAAGCCCAAAACAAACACAATTGACGGATCAAAATTATGCTCGAGTTGAGCCTTCGAAGGTATCAAATAAGAAGAGTTCAACTTCCGATGCAGATTCTGCTGCTAAACCATCTCAGCTTCTCCCTGTCAAAGAATCTCAGGACCATGCTTCCAAGCATCAACACAAAGTTTCTTGGGGCTATTGGGGAGATCAGCATAATGTTGGTGAGGAGAGTTCAATAATTTGTCGCATATGTGAGGAGGAAGTCCCCACTCAACATGTTGAAGATCATTCAAGGATTTGTGCTGTTGCTAATAAATGTGATCAGAAAGGTCTGAGTGTCAATGAGCGTCTTCTCAGAATTGCTGAAACACTGGAAAAAATGATGGAATCATGTACACAGAAGGATATCCATAACTTACCGGGAAGTCCTGATGTTGCAAAAGTGTCAAATTTAAGTATGACTGAAGAATCTGATGTTTTATCCCCTAAGCTTAGTGACTGGTCTCGTAGAGGTTCACAGGATATGCTAGATTGTTACCCTGAAGCTGATAATTCTGTTTTTATGGATGAACTTAAGGGATTACCACTGATATCATGTAGAACTCGTTTTGGTCCCAAGTCTGACCAAGGTATGACAACATCATCTGCTGGCAGCATGACTCCCAGGTCTCCTTTAATGACACCAACGACTAGTCAGATTGACTTACTCTTGGCTGGGAAGGGTGCATATTCTGAGCATGATGATCTCCCACAGATGAATGAACTTGCCGATATAGCACGATGTGTAGCAAACACGCCTCTGGATGATGATCGAACGATGTCATATTTATTATCCTGTCTTGATGATCTGCGGGTTGTTGGTGAACGAAGGAAATTCGATGCACTCACTGTGGAGACCTTCGCAACGCGAATTGAGAAACTAATACGGGAGAAGTATTTGCAACTTACTGAGATGGTGGATGTCGAAAGGATAGATATAACAAGCACTGTAATTGATGAAGATGCTCCCTTGGATGATGATGTGGTTCGTAGCTTGAGAACAAGCCCAGTTCATTCGTCGGCGGATCGTACCTCTATTGACGATTTTGAGATTATAAAACCTATCAGTCGAGGAGCATTTGGACGGGTTTTCTTGGCTAAAAAGAGAACAACCGGTGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATCCGCAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTGCGCAATCCATTTGTGGTTCGTTTCTTCTATTCTTTTACATGCCGTGAGAATTTGTATCTTGTCATGGAGTACCTTAATGGAGGTGACCTGTATTCATTATTAAGGAATTTAGGTTGTATAGATGAGGAAGTTGCCCGTGTATATATTGCTGAAGTGGTGCTTGCCCTAGAATATTTGCATTCACTGCGTGTGGTTCATCGTGACTTGAAACCTGACAATTTATTGATTGCACATGATGGTCATGTTAAGTTGACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGATTTGTCTGGTCCAGCTGTTTGTACTTTTGTCTCATCAATACTTGGAGAGGATGAACCTCGATTACCTACTTCTGAGCATCAACAGGAACTAAGGAAGAAACGTTCTGCTGTAGGTACACCTGATTATTTGGCACCAGAGATACTCTTGGGAACTGGACATGGGTATACTGCAGATTGGTGGTCTGTTGGTGTCATTTTATTTGAATTGCTTGTTGGCATTCCACCCTTCAACGCAGAGCATCCTCAGAGTATATTTGATAATATTCTTAATCGTAAGATTCCGTGGCCTGCGGTGCCAGAAGAAATGAGTCCTGAAGCACATGATCTTATTGATCGATTATTGACTGAAGATCCTAATCAAAGACTTGGAGCCAGAGGGGCATCAGAGGTGAAGGAACATGTTTTCTTCAAAGATATAAACTGGGACACACTTGCCAGGCAGAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGATACCAGTTATTTCACTAGTCGCTACTCGTGGAATACTTCTGATGGCCTTGCCTATCCTGCAAGTGATGTTGATGATTCCAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTCAGGGTCTTGCTGACTTTGACATTGGCTCATCTATGAATTACTCTTTCAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTGGCATCAATTAACTATGATCTTCTCACCAAGGGATTGAAAGACGATCCATCTACACATTCTAGTCAATAG 3714 0.4286 MVFKGRFFSSSKKSDSDGSSNSPRSISYNSPSRSDKKKLKDSKKNNIDDAAKSKSSPTGSSSPSPSPSSSVSPILASSLGLNKIKTRSGPLPQESFFSFRNDNNKIGASNLSKSDGKKEVVEKQKSRGSIRESFGSDYSVSPGTGATCSSREDSPNVLAPSPLQNEESSSNSGRHESSWAQSGGLRNSDASTPEVAYDYENPKESESPRFQAILRVTSAPRKRFPADIKSFSHELNSTGVRPFPFWKPRRLNNVEEILDGIRAKFDKAKDEVNSDLAIFAADLVGILEKDADIHPEWQETIEDLLILARRCAMTSPGEFWLQCEGTVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEVVFNLRQSRVLHSAAKCIPPGLERDGKSSSAAKASKASAKKAYSQEQHILNWKKDVVQPQNLLLPPHDDPSKNLDSPPIRNRMSFWKKFPSPPGKSPKQTQLTDQNYARVEPSKVSNKKSSTSDADSAAKPSQLLPVKESQDHASKHQHKVSWGYWGDQHNVGEESSIICRICEEEVPTQHVEDHSRICAVANKCDQKGLSVNERLLRIAETLEKMMESCTQKDIHNLPGSPDVAKVSNLSMTEESDVLSPKLSDWSRRGSQDMLDCYPEADNSVFMDELKGLPLISCRTRFGPKSDQGMTTSSAGSMTPRSPLMTPTTSQIDLLLAGKGAYSEHDDLPQMNELADIARCVANTPLDDDRTMSYLLSCLDDLRVVGERRKFDALTVETFATRIEKLIREKYLQLTEMVDVERIDITSTVIDEDAPLDDDVVRSLRTSPVHSSADRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCIDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHVKLTDFGLSKVGLINSTDDLSGPAVCTFVSSILGEDEPRLPTSEHQQELRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQSIFDNILNRKIPWPAVPEEMSPEAHDLIDRLLTEDPNQRLGARGASEVKEHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLAYPASDVDDSSDADSLSGSSSCLSNRQDEVGDECQGLADFDIGSSMNYSFSNFSFKNLSQLASINYDLLTKGLKDDPSTHSSQ 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0928 1237 SMART serkin_6 823 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0928 1237 MobiDBLite consensus disorder prediction 1164 1182 - -
Lal16g0928 1237 MobiDBLite consensus disorder prediction 466 501 - -
Lal16g0928 1237 MobiDBLite consensus disorder prediction 667 686 - -
Lal16g0928 1237 Coils Coil 575 595 - -
Lal16g0928 1237 MobiDBLite consensus disorder prediction 51 111 - -
Lal16g0928 1237 Pfam Protein kinase domain 823 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0928 1237 ProSiteProfiles Protein kinase domain profile. 823 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0928 1237 MobiDBLite consensus disorder prediction 12 30 - -
Lal16g0928 1237 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 1230 - -
Lal16g0928 1237 MobiDBLite consensus disorder prediction 115 130 - -
Lal16g0928 1237 Gene3D Phosphorylase Kinase; domain 1 821 1143 - -
Lal16g0928 1237 MobiDBLite consensus disorder prediction 433 518 - -
Lal16g0928 1237 MobiDBLite consensus disorder prediction 131 189 - -
Lal16g0928 1237 MobiDBLite consensus disorder prediction 1159 1182 - -
Lal16g0928 1237 ProSiteProfiles AGC-kinase C-terminal domain profile. 1115 1219 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal16g0928 1237 MobiDBLite consensus disorder prediction 31 50 - -
Lal16g0928 1237 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 8 1230 - -
Lal16g0928 1237 CDD STKc_MAST_like 829 1119 - -
Lal16g0928 1237 Coils Coil 251 271 - -
Lal16g0928 1237 Gene3D Transferase(Phosphotransferase) domain 1 907 1132 - -
Lal16g0928 1237 SUPERFAMILY Protein kinase-like (PK-like) 820 1151 IPR011009 -
Lal16g0928 1237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 942 954 IPR008271 GO:0004672|GO:0006468
Lal16g0928 1237 MobiDBLite consensus disorder prediction 393 412 - -
Lal16g0928 1237 MobiDBLite consensus disorder prediction 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0928 Lal-Chr16 6154398 6164438 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0928 51 1231 AGC Kinase Gene Family AT3G17850 68.421 0.0 1609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Lal16g0928 Pkinase 3.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0928 - - cam:101496611 1824.68