Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0918 ATGGCAGAACCAAACTCGGTTGATGTGATTTTGGACTTTCTGAGGAAGAACCGCTTCACGAGAGCTGAGGCAGCTTTGCGTAGTGAGATCAATAACTGTCCTGACTTAAATGGCTTCTTTCAGAAACTTACATTGGAGGAAAAGGCCTCACTTGATATGCCACAAAATGATAAGGGGAAGCTGGGCTTAGAGATTCAAGGGGTGGATTCACGTGAAAGTGTTGAAGTTTCTAAAGAATTGATTGTGAAGGAAATAGAATACAGGACTGGTAGAAATGCAACTGAAACTAAGTGGAAAACTTATTCTCCTTCTACAAGTGAACGGAATAAATCAAATGAATTGGTTTGGACCGGTGACAAACACTTCAATTTCTCTAAGAGTTCGGAGGACCGTATACTTGATTTATTCTCATTGAAGTCCAATCCCAGCAATGGTCCTGTTGAGCCTTGCCAAAATGGTGCTGGTAGTAGGGCTACTAATACTTCAAAGGTTTCTGTATCTCATCAGTCAAAATATCAAACTAATGAAGATGTTGCTGCAGTTGCAATCAAGAGTAATGCAAAGGCTGGTGAGGAAAGTGCTGTGCTTGCAGCTAATAAATCCTTATTGGTTGGAAGTAGTAGTAAAGCGTCTGTGGAACCAAAGTATGTCCTTGTGTTGCAAAGCAAAGAACCTAGTGAACATGATCACCAGCTAAAATTTAGTAGTTCATCTCTTAAGGTGAACATTTCAGATAATCCCTGGTCTAGAACTGACGAGAATGCGAATTCATCTTCAGACCCATGGAATTGTTCAGTCAAGACTGTTCTTCCCTACCCGAAGGGGGATATATCTGCAAGTTTTGATGTTGCAATTTATTCTGACAAAAATGTGGAAAAACGAAACATAGAAGTTAGTGATATTAGTGCATCTATAAAAGAGCAGGTGGATGATGTCAGGAGACCTATTTTCTTGGGCAAGTCACACCGAAGTTCTGAACTAAAGACCATTGGCAGCTTAAGTTTTCCTCTTTTGTCTGAAAATCAGAGGGAAGAGTTTCCTAGGCTTCCTCCTGTTAAACTCAAGTCAGAAGATAAGCCTTTGGCCGTTAAGTGGGAGGAGAAGTTTGAGCGAGATGGACCGACTTCAAAATTCTCTGTTGCTGACAGCACTTTATCTATTGGTTCATATCTGGATGTGCCTACTGGGCAAGAAATTAATCCTTCAGGCATGAAGAGGGCTGCCGGGGGAAGTTGGTTGTCTGTGAGTCAAGGGATAGCAGAGGACACATCTGATCTTGTATCGGGTTTTGCAACAATTGGTGTTGGGTTGAGTGAATCCGTAAACTATCCAAATGAGTATTGGGACTCTGATGAATATGATGACGATGATGATGTTGGGTACATGAGGCAGCCTATTGAGGATGATGCCTGGTTTTTGGCGCATGAAATTGATTATCCTAGTGACAACGAAAAGGGGACTGGGCAAGGTAGTGTTCCAGATCCTCATGAAGGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGGTTCTTACTTCTCTGGTGAGCGGTTTCTTCAAGTGAGTAATGTTGAACCAGTCAAAGCTTCAGATGATCACATTGGTCTAACAGTTACTGAAATGTATGGAAGGACTAATGATAATAGGTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTAAATGTAATTCGTGCAGGACCTGTCTGGCAAGGCTTTGTCGCTCAGACAAATGAACTCATCATGGTAGGGGATGGGAAGGTTTTGGATGATAGTGGAAGATCACAATTAGAGGGTATCTGTATGGTTGATGATCAGCATGGTTCGGTTAGGTCTATTGGGGTAGGGGTTAACAGTGATGCTGCTGATATTGGTAATGAGGTGCGTGGAAGTTTGATTGGTAGTAGTAGTGAAGGGCATCTAAAATATTTCCGTGATTGTGATGTTGGGGTTGGTGGCTTCAGACGCTCCAATCATGATTTGGATAAGAACTCTATTAGTAAATCAAACAAAAATAAGAAGAAAGATGACATGAATGAGTCAAATAAATATGTCACCAGGGGTGGTAAGGATGCACACTTGCAGATGAAATCACATAGTGGTGGGAACTTCTCATTTCCTTTATCCTCGATAGATGGCCATATGGTTGAGGCTGCCTCTAAACAGTCCCCGTGGTCAAATAACTGCAATGTAGATGAAACTGATGACTGTCTTAATGCATTTGTGGGATCAAATGAAATGCTTGCTTCATGGATGCGGGAGAGCAGTGATTCTGCACCCATTAAAATTTTTAGGGTTGAGAATAATGCTAACCAAGGAAGATCCAGAAACTCTTCTCCAGCAACAGTCTCAAATTACGGATATTATGAAAGAGAGCATATCAAGCCAGAAGAGGATGAAAAGGTTGATGTTTCAAGGGAGGATGATTTAGGGGCATCACTAGATGATGAAGAGGCTGCTGCTGTGCAAGAGCAGGTACGGCAAATAAAGGCCCAAGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATATCACTGAGTATTTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTGCACACAGGCATGGATGTCTGTGTAAAAATTATAAAGAACAACAAGGATTTTTTTGACCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACCTTCTTCGGTTATATGATTATTTTTATTATCGAGAACATTTGTTGATAGTATGTGAACTACTCAAAGCAAACTTATATGAGTTTCATAAATTCAATAGAGAATCAGGGGGTGAAGTGTACTTCACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAATCACTGCAGTTTTTGCATAGCCTCGGACTAATACATTGTGATTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGTAGGTGTGAGGTGAAGGTCATTGATCTTGGAAGTAGCTGTTTTGAGACAGATCACCTTTGCTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGGCTCCCATATGACAAGAAGATTGATATCTGGTCACTTGGCTGCATCTTGGCTGAACTTTGTACTGGCAATGTTCTCTTCCAAAATGATTCATCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGTCCAATTGATCAAAGTATGCTTGCAAAAGGACGAGATACATATAAGTACCTCACCAAAAATCATATGCTTTACGAACATAATCAGGAAACCAACAGGTTAGAATACTTGATTTCAAAAAAGACATCTTTGAGGCATAGATTGGCAATGGCAGACCAAGGCTTCATTGACTTTGTTGCTCATTTGCTTGAGATCAACCCAAAGAAGCGGCCTTCGGCAACTGATGCCCTGAAGCACCCATGGTTATCATATCCTTATGAACCCATATCATCTTGA 3567 0.409 MAEPNSVDVILDFLRKNRFTRAEAALRSEINNCPDLNGFFQKLTLEEKASLDMPQNDKGKLGLEIQGVDSRESVEVSKELIVKEIEYRTGRNATETKWKTYSPSTSERNKSNELVWTGDKHFNFSKSSEDRILDLFSLKSNPSNGPVEPCQNGAGSRATNTSKVSVSHQSKYQTNEDVAAVAIKSNAKAGEESAVLAANKSLLVGSSSKASVEPKYVLVLQSKEPSEHDHQLKFSSSSLKVNISDNPWSRTDENANSSSDPWNCSVKTVLPYPKGDISASFDVAIYSDKNVEKRNIEVSDISASIKEQVDDVRRPIFLGKSHRSSELKTIGSLSFPLLSENQREEFPRLPPVKLKSEDKPLAVKWEEKFERDGPTSKFSVADSTLSIGSYLDVPTGQEINPSGMKRAAGGSWLSVSQGIAEDTSDLVSGFATIGVGLSESVNYPNEYWDSDEYDDDDDVGYMRQPIEDDAWFLAHEIDYPSDNEKGTGQGSVPDPHEGGPAKDEDDDQSFAEEGSYFSGERFLQVSNVEPVKASDDHIGLTVTEMYGRTNDNRLMAQYDGQLMDEEELNVIRAGPVWQGFVAQTNELIMVGDGKVLDDSGRSQLEGICMVDDQHGSVRSIGVGVNSDAADIGNEVRGSLIGSSSEGHLKYFRDCDVGVGGFRRSNHDLDKNSISKSNKNKKKDDMNESNKYVTRGGKDAHLQMKSHSGGNFSFPLSSIDGHMVEAASKQSPWSNNCNVDETDDCLNAFVGSNEMLASWMRESSDSAPIKIFRVENNANQGRSRNSSPATVSNYGYYEREHIKPEEDEKVDVSREDDLGASLDDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHITEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLESLQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSSATLLARVIGIIGPIDQSMLAKGRDTYKYLTKNHMLYEHNQETNRLEYLISKKTSLRHRLAMADQGFIDFVAHLLEINPKKRPSATDALKHPWLSYPYEPISS 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0918 1188 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1186 - -
Lal16g0918 1188 SMART serkin_6 877 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0918 1188 PANTHER - 2 1186 - -
Lal16g0918 1188 Gene3D Transferase(Phosphotransferase) domain 1 931 1179 - -
Lal16g0918 1188 Coils Coil 829 849 - -
Lal16g0918 1188 SUPERFAMILY Protein kinase-like (PK-like) 866 1181 IPR011009 -
Lal16g0918 1188 Gene3D Phosphorylase Kinase; domain 1 871 958 - -
Lal16g0918 1188 Pfam Protein kinase domain 877 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0918 1188 CDD PKc_DYRK_like 877 1179 - -
Lal16g0918 1188 MobiDBLite consensus disorder prediction 667 692 - -
Lal16g0918 1188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1003 1015 IPR008271 GO:0004672|GO:0006468
Lal16g0918 1188 MobiDBLite consensus disorder prediction 479 510 - -
Lal16g0918 1188 ProSiteProfiles Protein kinase domain profile. 877 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0918 Lal-Chr16 6054597 6063464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0918 876 1174 MAP Kinase Gene Family AT5G19010 29.467 1.44e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lal16g0918 Pkinase 2.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0918 - - lang:109331412 1971.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0918 16 6054597 6063464 Lal15g0900 15 6766500 6778495 LSH
Lal16g0918 16 6054597 6063464 Lal23g0714 23 9783775 9794048 LSH