Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0910 ATGAGTTTGAGTGAAGTTATCTCACTCTCACTCACTCCTCCTCTTTCTTCATACACCAACACACAAACTCTTTCTTTCAATCACCATTTCCAATTCCATAACCCTCTCTTCAAATTCAATAATACATTATCATCTTCTTCTTTCTCCATTTCCAATCATCATCGTGTGGTATCTGCTGTTGCACCCGCACAACCTTCAATTTCAACCGTTGATTTTGATTATGATGAATACGTGGTTGTCAATTTCTACCAGTTTGTGTTTATCAAAGATCCACATGCTGAAGTTGATAAACACCTTTCTTTCTTGCACCTCCAGGGACTCGACATTCATGGAAGAATCTATTTGAATGAACAAGGGATTAATGCACAGTATAGTGGGCCATCAAAAGATGCTCTGGTGTATCTCAACTGGGTAAGAGAGGATAACAGGTTTTCTGACATCCTGGCTCAGATATCTCCATCAGAAAATGGACATGCCTTTCCGAAATTGAAGTTGCGATATAAGCCCACATTATGTCAAGATGGCATATCACATCTTCCCTTGCTTGATCCTTCAGCGCGGGCAATACCTTTAGCACCTTCCGAATGGAAAAATAAATTGGAAGCAATCAATAAAACAGATCTTATATCAGGGGAACATCCTAACAGAAATAACATTATATTGGATATGAGAAATGGTTATGAGTGGGATGTTGGACATTTTCACGGGGCTCAGCGACCTAATGTTGACTGCTTTAGGAACACTTCATTTGGTCTGTCTGAGGAAGAGATCACTGCTTCAGACCCTTTATCAAATGTAGATAAAGAAAAGGCAAACATATTGATGTATTGTACTGGAGGGATTCGCTGTGATGTATATTCTACAATACTAAGGCAACAGGGATTTCAGAATTTGTATACCTTGGAGGGAGGCATTTCTCACTATTTAAAGAATGAAGGTCCTGCAGAATGGGTAGGAAATTTATTTGTATTTGACTCTCGTTTGGCCCTCCCTCCTTCAATGTTCTATCCCCGGGCCACAACTGAAGCAGAGATAACTCAAGTTTCTGGAGATGATAAGTTTGCAAAATGCTACATATGTTGTTCAGAAGTCACTGAATTGAGACACAGGAACTGTGCAAATCTCGACTGTAATCTACTTTTCCTATGCTGCAGAAAATGTGTCAAAGAGTTAAGAGGATGTTGTTGTTTGAGTTGCACTACTGCTCCTAGACTTAGACCTGTTCTAAATGGAGAGCACAGATATAAAAAATGGCACATCTATCGTGATATGGATATGCTAGAGAAGATGAAAATTTCAACTTGA 1305 0.3923 MSLSEVISLSLTPPLSSYTNTQTLSFNHHFQFHNPLFKFNNTLSSSSFSISNHHRVVSAVAPAQPSISTVDFDYDEYVVVNFYQFVFIKDPHAEVDKHLSFLHLQGLDIHGRIYLNEQGINAQYSGPSKDALVYLNWVREDNRFSDILAQISPSENGHAFPKLKLRYKPTLCQDGISHLPLLDPSARAIPLAPSEWKNKLEAINKTDLISGEHPNRNNIILDMRNGYEWDVGHFHGAQRPNVDCFRNTSFGLSEEEITASDPLSNVDKEKANILMYCTGGIRCDVYSTILRQQGFQNLYTLEGGISHYLKNEGPAEWVGNLFVFDSRLALPPSMFYPRATTEAEITQVSGDDKFAKCYICCSEVTELRHRNCANLDCNLLFLCCRKCVKELRGCCCLSCTTAPRLRPVLNGEHRYKKWHIYRDMDMLEKMKIST 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0910 434 ProSiteProfiles Rhodanese domain profile. 214 317 IPR001763 -
Lal16g0910 434 Pfam UPF0176 acylphosphatase like domain 77 169 IPR040503 -
Lal16g0910 434 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 75 424 IPR020936 -
Lal16g0910 434 Pfam Rhodanese-like domain 215 309 IPR001763 -
Lal16g0910 434 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 181 330 IPR036873 -
Lal16g0910 434 Gene3D - 68 171 - -
Lal16g0910 434 SMART rhod_4 204 314 IPR001763 -
Lal16g0910 434 CDD RHOD_YceA 191 310 - -
Lal16g0910 434 Pfam Rhodanase C-terminal 319 400 IPR022111 -
Lal16g0910 434 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 75 424 - -
Lal16g0910 434 Gene3D - 183 344 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0910 Lal-Chr16 6001228 6007141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0910 68 423 Sulfurtransferasese or Rhodanese AT1G17850 64.130 6.83e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0910 - - gmx:100814358 632.869