Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0887 ATGCATATAGAGGAATTAAAGGGAGGTGAGGTGGGGGAAGAAGGTGGTGAGGGAGGAAGAATTTCAAGTGTTGTTGCTTCTGATGCGAAAAGGGTTTTAGTTGGAGCTGGGGCTCGTGCACTTTTTTACCCAACGTTGTTTTACAATGTTGTTAGAAATAAAGTTCAGGTTGAGTTTCGATGGTGGGATAAGGTTGATGAGATTCCGCGTAGTGCTGTTCCATTCCCTGTTGATGTTCCTCAATTGAAGGAACTTGGTGTTCGTGGGGTCATCACATTGAATGAGCCATACGAGACTTTGGTTCCGACCAAATTATATGATGCTCATGGTATTGACCATCTGGTGATTCCTACTAGAGATTACTGTTTTGCTCCATCTTTGCGTGATATTTGCCATGCTGTGAACTTCATACATGGTGAGGAGTATGCAAATTGGTTGACTATAATGATATCCAACAATAAAGTGGCATAA 471 0.4204 MHIEELKGGEVGEEGGEGGRISSVVASDAKRVLVGAGARALFYPTLFYNVVRNKVQVEFRWWDKVDEIPRSAVPFPVDVPQLKELGVRGVITLNEPYETLVPTKLYDAHGIDHLVIPTRDYCFAPSLRDICHAVNFIHGEEYANWLTIMISNNKVA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0887 156 Gene3D Protein tyrosine phosphatase superfamily 65 154 IPR029021 -
Lal16g0887 156 PANTHER - 1 143 - -
Lal16g0887 156 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8 ISOFORM X1-RELATED 1 143 - -
Lal16g0887 156 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 73 139 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0887 Lal-Chr16 5834322 5838663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0887 23 138 Protein tyrosine phosphatase (PTP) family AT2G35680 72.650 1.49e-56 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0887 - - gmx:100790413 204.912