LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal16g0884	ATGGCTATATCCACCCTCTTCTTTTTGCTCACCCTTTTCTTTCATCCAGTTCAGTTGGCTTTGGGAAACAACATAACTTTGAATACAACACTTTCCACCCATGACAACGGTCTTGTGTGGCCTTCATCTTCAGGTGAATTTGCATTCGGGTTCCGCCAAATCAATGACAGTGACACTAACCAGAACCAAAAACTCTTCTTGGTTGCCATCTGGTACCATAACATACCTGACAAAACTATTGTCTGGAATGCAAGAACGGATAAGCCTGTATCGAAAGGGTCCACGGTTCAGCTAACAACAAGTGGCTTAACCATCCGTGATCCGCAAGGTGAAGCTATATGGACAGCAGAACCAACTGAATCTGTTTCCTATGGGGCTATGCTGAACACTGGCAACTTTGTTCTAATAAGCACTGATTCTAATTCCACTTCAACCTATGTGTGGGAAAGCTTCAAGAATCCCACCGACACATTGCTGCCTAGCCAAAACTTGGAAGTACAAGGTACCCTTACATCTAGATTGACAGAATCCAGTTATACAAAAGGAAGGTTTCAACTTTATTTTGATAAAGGTGATATGTTCCTAACTGGCATTGGCTGGCCAAATGACAAAGCTAATTCTCGCTACACAAGTTATTTTAGTGTTGGAACAAGTTCAGCCTCAAAGCTAGTGTTTGATAGTAATGCAGATATTTATGTAGAGGAAATGAATGGCATGTCACTTGTATGGGAAAATTCAGCTCTTGATCCTAACGCATATTACTATAGAGCTGCACTTGATTTCTATGGAGTTTTTACACAGTATGCTCATCCAAAGAAGGGCTCAGATGGCCAGCAAGGTTGGTCTATAGTGCGTTATGTTCCTACCGACATTTGCTTCGCCATTTTGAGTGATTACGGAAGTGGTTCCTGTGGTTATAATAGCTACTGCTCCATGGAAAACCAGAGGCCTATTTGCAAATGTCCAGATGGGTATTCTCTGCTTGATCCAAAGAACCAATTTGGTGGATGCCAACCTGACTTGTCTCTAGGTTGTGGAGCAGATGACACAGGATCAAGAGACGGGCTTGAAGAGTTATTTCAATTTAAGGTTTTAGAAAATGTTGATTGGCCAAATGGTGATTATGAGAGGTTAGACAATTATACTCCACTTGACTGTCAAACAACTTGTTTGCGTGATTGTTTGTGTGTTGTGGCTATATTTGTCAACAAAACAGGACAATGTTGGAAGAAGAAATTACCCCTCTCTAATGGAAGATCAAAGACAAAGGAAGGTCATATAGCATTCATCAAAACAAGAATTCGCCCATTGAGTGACCTTGATCCTGATTCACCAAAGGGCTATCCTAACGGTGCAAAGGTAGAAGATCCAGCTAGGTCAATACTAATAGGGTCACTTGTTGGTTCTCTTGTCATTAACAGCATGTTTCTAGCATCAGTTATTCTCTTTTTGCTCCTAAAGCCAAAAAAGATACTCCAAGCTTCAAGCGTTTTGGAAACAAATCTGTATTCCTTTCCTTATGAGACATTGAAACAATACACACAGGATTTCTGTGAAGAACTAGGTCGTGGTTCTTTTAGCATTGTTTATAAAGGTACTCTAAACTCAGGTTCTGATCAATTTGTTGCTGTGAAGAAGCTGAACAGATTAGCTATAGAACGAGAAAAGGAGTTTAAGACAGAATTGAATGCTATTGCTAAAACTAGCCACAGGAACTTGGTTCGGTTGATTGGATTCTGTGATGAAGGAACTCATAGGCTTCTTGTATATGAGTTCATGAGCAATGGCACCCTCGCAGACATCCTATTTGGACAAGTACAACCCAATTGGAATCTAAGAGTTACAATTGCTTTGGGAGTTGCAAAAGGATTGGTTTACCTACACGAAGAGTGTGGCACTCCTATAATTCACTGTGATATAAAACCTCAGAATGTACTCATAGATGAATACTTCACACCAAAAATTTCAGACTTTGGGTTGGCCAAGTTGCTAATGCTCGATCAAAGTAAAACTCATACCATGATTAGAGGAACTCGAGGATATGTTGCCCCTGAATGGTTCAAGAATGCTCCTGTGACAGCTAAAGTTGATGTTTATAGCTTTGGTGTGATGCTGTTAGAAATCATTTGTTGTAGAAGAGGTGTGCTCGATTTTGAGGAAGAAGAAGAAGAAGCTATATTGACAGACTGGGCTTATGATTGCCTTAGGGAAGGAAGAATAGATGCTCTAGTAAAGGAAGACAAGGAGGCTATGGCAGATAAAATCAGGCTGAAAAAGTGGGTGATGATAGCAATCTGGTGCATTCAAGAGCATCATGATATGAGGCCTACAATGAAGACAGCCATGCACATGTTAGAAGGACTAGTTGAAGTCCCACATCCACCATCACCATCACCATCTTCTTTCACCTTAGCTTCTTGA	2421	0.4069	MAISTLFFLLTLFFHPVQLALGNNITLNTTLSTHDNGLVWPSSSGEFAFGFRQINDSDTNQNQKLFLVAIWYHNIPDKTIVWNARTDKPVSKGSTVQLTTSGLTIRDPQGEAIWTAEPTESVSYGAMLNTGNFVLISTDSNSTSTYVWESFKNPTDTLLPSQNLEVQGTLTSRLTESSYTKGRFQLYFDKGDMFLTGIGWPNDKANSRYTSYFSVGTSSASKLVFDSNADIYVEEMNGMSLVWENSALDPNAYYYRAALDFYGVFTQYAHPKKGSDGQQGWSIVRYVPTDICFAILSDYGSGSCGYNSYCSMENQRPICKCPDGYSLLDPKNQFGGCQPDLSLGCGADDTGSRDGLEELFQFKVLENVDWPNGDYERLDNYTPLDCQTTCLRDCLCVVAIFVNKTGQCWKKKLPLSNGRSKTKEGHIAFIKTRIRPLSDLDPDSPKGYPNGAKVEDPARSILIGSLVGSLVINSMFLASVILFLLLKPKKILQASSVLETNLYSFPYETLKQYTQDFCEELGRGSFSIVYKGTLNSGSDQFVAVKKLNRLAIEREKEFKTELNAIAKTSHRNLVRLIGFCDEGTHRLLVYEFMSNGTLADILFGQVQPNWNLRVTIALGVAKGLVYLHEECGTPIIHCDIKPQNVLIDEYFTPKISDFGLAKLLMLDQSKTHTMIRGTRGYVAPEWFKNAPVTAKVDVYSFGVMLLEIICCRRGVLDFEEEEEEAILTDWAYDCLREGRIDALVKEDKEAMADKIRLKKWVMIAIWCIQEHHDMRPTMKTAMHMLEGLVEVPHPPSPSPSSFTLAS	806

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal16g0884	806	CDD	PAN_AP_plant	343	432	-	-
	Lal16g0884	806	Gene3D	Phosphorylase Kinase; domain 1	484	592	-	-
	Lal16g0884	806	CDD	STKc_IRAK	521	788	-	-
	Lal16g0884	806	PANTHER	MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN	17	799	-	-
	Lal16g0884	806	ProSiteProfiles	Protein kinase domain profile.	515	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal16g0884	806	ProSiteProfiles	Bulb-type lectin domain profile.	22	148	IPR001480	-
	Lal16g0884	806	SUPERFAMILY	Protein kinase-like (PK-like)	498	786	IPR011009	-
	Lal16g0884	806	Pfam	D-mannose binding lectin	79	167	IPR001480	-
	Lal16g0884	806	PIRSF	SRK	1	806	IPR024171	GO:0004674
	Lal16g0884	806	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	635	647	IPR008271	GO:0004672\|GO:0006468
	Lal16g0884	806	SMART	blect_4	29	154	IPR001480	-
	Lal16g0884	806	Gene3D	-	28	170	-	-
	Lal16g0884	806	ProSitePatterns	Protein kinases ATP-binding region signature.	521	546	IPR017441	GO:0005524
	Lal16g0884	806	Pfam	Protein kinase domain	519	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal16g0884	806	Gene3D	Transferase(Phosphotransferase) domain 1	593	799	-	-
	Lal16g0884	806	SUPERFAMILY	alpha-D-mannose-specific plant lectins	66	191	IPR036426	-
	Lal16g0884	806	SMART	serkin_6	515	789	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal16g0884	806	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	17	799	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal16g0884	Lal-Chr16	5814842	5817262	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal16g0884	464	791	Receptor kinase-like Gene Family	AT1G56120	41.888	2.41e-67	238

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Lal16g0884		Pkinase	3.7e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal16g0884	-		-	gmx:100775269	900.968