Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0854 ATGGGTTGTTTCCACTCCAAAACCGCTCATCTTCACTCTCCTGAAGATCCTCCTACCTCCTTACCCGATTCTAAGAAACCTGATCCAGGTAATGAGAATGATGTTGAGCAAGACTGTGAGATTCCAGCATTCAAAGAGTACAGCCTGAATGAACTGAGAAGGGCCACAAATGAGTTCAGCACAAGTAACATTGTTTCTGAGAGTGGTGAGAAAGCTCCGAATGTTGTTTACAAAGGGAAGCTCGAGAACAACCAGTTAGTTGCTGTCAAACGGTTCTCCAAACTCTCCTGGCCTGATGCTCAACAGTTCACGGCAGAGGCAGCTGGAGTTGGGAAAGTAAGGCATAAGAGAATGGTGAATCTGATCGGTTGTTGTGCTGAGGGAGATGAAAGGCTCTTGGTTGCTGAGTACATGCCGAATGATACTTTATCCAAGCACCTCTTTCATTGGGACAAGCAACCATTACCATGGGAAATGCGTGTTAGAGTTGGATACCATGTTGCTCAGGCACTAGATCATTGTAGCATGGAGAACCGGAAAATATACCATGATCTGAATGCGTATAGGATTCTCTTTGATGAGGATGGTGATCCCCGTTTATCAAGTTTTGGGCTTATGAAAAATAGTCGAGACGGGAAAAGCTACAGTACTAATTTAGCTTATACTCCACCCGAATTTTTGCGAACAGGCAGGGTAATCCCAGAGAGTGTGATCTACAGTTATGGAACTGTTCTTCTTGATCTTTTGAGTGGCAAGCATATTCCTCCAAGCCATGCTCTGGACCTAATTAGAGGGAAGAATGCATTGTTGTTGATGGACTCATCCCTAGAAGGACAATATGCAAATGATGATGCCACAAAGTTGGTTGAGCTTGCTTCGAAATGTCTTCAGTTCGAAGCGAGAGAACGGCCTGATATCAAATTTCTTCTTTCTGCAGTTGCACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGTTAATGGGCCTTACTAAAAATACAGGGGTCCTGCCAACCATGCTTTCTCCTCTCGGAAAGGCTTGTGCAAGGATGGATCTTACTGCAGCACATGATATATTATTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCATTCCAAGAGTGGACTCAACAAGTGCAAGACATCTTGAACACAAAGAAGTTTGGCGATATTGCGTTTAGAGATAAGGATTTCAAAAATGCCATTGAGTATTATTCTAAGTTGGTGGTTATGATGTCTGTTCCTTCTGCTACTGTCTTTGCAAGGAGAGCCTTCTCCTACTTGATGAATGATCAGGCAGAACTCGCGCTAAGGGACGCCATGCAGGCGCAGGTATGCATACCTGATTGGCCAACCGCGTTCTACTTGCAGGCTCTTGCTCTCTCAAAGTTGGGAATGGACACTGATGCACAGGACATGCTTAATGATGGGGCAGCCTTTGAAGCAAAGAGATCTAACAGCTGGCGTGGTTAA 1488 0.4415 MGCFHSKTAHLHSPEDPPTSLPDSKKPDPGNENDVEQDCEIPAFKEYSLNELRRATNEFSTSNIVSESGEKAPNVVYKGKLENNQLVAVKRFSKLSWPDAQQFTAEAAGVGKVRHKRMVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVGYHVAQALDHCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYANDDATKLVELASKCLQFEARERPDIKFLLSAVAPLQKQKEVASHVLMGLTKNTGVLPTMLSPLGKACARMDLTAAHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMDTDAQDMLNDGAAFEAKRSNSWRG 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0854 495 MobiDBLite consensus disorder prediction 19 37 - -
Lal16g0854 495 SUPERFAMILY TPR-like 386 484 IPR011990 GO:0005515
Lal16g0854 495 Gene3D Phosphorylase Kinase; domain 1 33 137 - -
Lal16g0854 495 MobiDBLite consensus disorder prediction 1 37 - -
Lal16g0854 495 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 494 IPR045845 GO:0004672|GO:0009742
Lal16g0854 495 SUPERFAMILY Protein kinase-like (PK-like) 41 313 IPR011009 -
Lal16g0854 495 ProSiteProfiles Protein kinase domain profile. 62 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0854 495 Gene3D Transferase(Phosphotransferase) domain 1 139 331 - -
Lal16g0854 495 Gene3D Tetratricopeptide repeat domain 385 494 IPR011990 GO:0005515
Lal16g0854 495 Pfam Protein tyrosine and serine/threonine kinase 75 310 IPR001245 GO:0004672|GO:0006468
Lal16g0854 495 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0854 Lal-Chr16 5551460 5559757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0854 14 316 Glycoside Hydrolase AT3G07070 33.742 2.57e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lal16g0854 PK_Tyr_Ser-Thr 2.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0854 K14500 - gmx:100793576 952.199