Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0851 ATGGGTAACGGTGTCTCGAGCCTTTGTTCTTGTCTCGAACCGGCGAACCGGACCGAACGCGACGAAGACGTTATTTTCTCAGTGGCTGAGCCGTTAGATGAAACCCTAGGCCACTCTTTCTGCTACGTCAGATCCTCGAACCGGTTCCTCTCACCAACCCACTCCGACCGGTTCGTTTCTCCTTCAACCTCCTTACGCTTCTCCCCGCCACATGAACCCAAGACTCGACCCGATTCGCACGAAACCGGGTTCAAAGCTATTTCCGGTGCCTCTGTTAGTGCTAACAGCTCCATTCCCAAGACCGTTATTCAGTTAGAAAGCAGCAACAATGGCAATAACAACAATGCCTTAGACGACGCCGTTTTGGATCACGGTGCTGCTGTAATAGTTAATGGTTTTGAAGGGACGTCGTCGTTTACCGCTCTCCCGCTTCAGCCCGTGCCACGTGGCGGTGAGCCTTACGAGAGGAGCGGTTTCTTTCTTTCTGGTCCGATTGAGAGTGGCGCCGCCGCATATTGCGGCGGTGCCAGTGGCGAGGTTCCGTTTTCAGCGCCGCTGGGAGGGTTTTACGTGAAGAAGCGGAAGAACGGGATTTCGTCCTTCAGGAAGGCGTTCCACCGGAACACATCGTCGGAGAAGAAGCGACCGTGGGTGGTGCCGGTGTTGAACTTCGTCGGGAGAAAGGAAGTTCTGGCGGATGGGGTGAAGGTGGTGAAATCAGTTACGGAGACAAAGAATGAGAGCAATGTGCAGTGGGCGCTTGGAAAAGCTGGTGAGGATCGAGTTCACGTGGTTGTTTCCGAGGAGCAAGGGTGGTTGTTCGTTGGAATTTACGATGGTTTCAATGGCCCTGATGCACCGGAGTTTCTGATGGGTCACCTTTACCGTGCAGTTCACAATGAGCTTCAGGGTTTGTTTTGGGAAATTGAAGATTCAGAGGAGAGTATTAACCCTTTGATTTTGAATGTTGCTGCTGAAAATTCAGTGCTTGACGAGGTTAAGAACAATGAGGGTACTGTAACTGAAATTGATGTTAAAGAAGACTCAAATTCGCGATCGGTGAAGAGGGTAACTTTCCAAGCAGACGGAACAGAGAGTAGAAGGCGTAGGCTGTGGGAATTTCTTGCTGAGGACCCTGAAGATGGACTCGATCTTTCCGGTTCTGATAGGTTTGCATTTTCGGTTGATGATGCTCTTAGTGTTAACAACGGCAATGCAGGGTCAGCAGTTAGTAGAAGGTGGCTTTTGTTGTCGAAATTGAAGCATGGATCAAAGCATAAAGAGGGTCATATTAGTGGGGAGTTGTTTGGGACTGAGGAGAAAGAGAATGTTGAGGTGGAAAATCAAAATCGGGTACAAGAGAAGCCATCTGGTGGCGGCAGTGGTAGTGGGAGGAAGAGGAAGGTTGGTCCTGTCGATCATGATTTGGTTTTGAGGGCAATGTCTAGGGCACTTGAAGTGACTGAGCTCGCATATTTGGATATTACAGATAAGCTTCTTGCTTCAAACCCGGAACTTGCTTTGATGGGTTCATGTTTGTTAGTTGTGTTAATGAGGGATGAGGATGTGTATGTGATGAATGTTGGGGATAGCAGAGCTATTGTGGCACACTATGAGCCGAAAGAGGTTGATTCTAATGTGGAATCGGGAAGTAAAGGAGATAGGGGGTCGAACACAGAGAGTATAGTTGAGGAGTGCTTAGCTTTAGGTGAAGGTGAAAGTGCTATCAAGTTGGGGAATGAGGGTACTGCTCAAGAAATGAGGTTGGCCGCTTTGCAGTTATCCACTGATCACAGCACTAGCATTGAAGAAGAAGTAATTAGAATCAAGAATGAACATCCTGATGATAGCCATTGTATAGTCAATGATAGAGTAAAAGGTCGTCTCAAGGTCACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCAAAGTTGAATGATGCCGTGCTAGAAATGTTTCGTAATGAATATATTGGCACTGCACCATATATATCCTGCAGTCCTTCACTGCGTCACCATAGATTATACCCAACAGACCAGTTCCTGATCCTCTCTTCTGATGGATTATATCAATATCTAACAAATGAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTCCCCGAAGGAGATCCTGCCCAACATTTAATAGAAGAGCTGCTCCTCCGTGCAGCTAAGAAGGCTGGGATGGATTTTCATGAGTTGCTGGATATCCCTCAAGGAGATCGGAGGAAGTACCATGATGATGTAACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCGTCCGGGAAGTATCTGTGA 2316 0.4745 MGNGVSSLCSCLEPANRTERDEDVIFSVAEPLDETLGHSFCYVRSSNRFLSPTHSDRFVSPSTSLRFSPPHEPKTRPDSHETGFKAISGASVSANSSIPKTVIQLESSNNGNNNNALDDAVLDHGAAVIVNGFEGTSSFTALPLQPVPRGGEPYERSGFFLSGPIESGAAAYCGGASGEVPFSAPLGGFYVKKRKNGISSFRKAFHRNTSSEKKRPWVVPVLNFVGRKEVLADGVKVVKSVTETKNESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHNELQGLFWEIEDSEESINPLILNVAAENSVLDEVKNNEGTVTEIDVKEDSNSRSVKRVTFQADGTESRRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVNNGNAGSAVSRRWLLLSKLKHGSKHKEGHISGELFGTEEKENVEVENQNRVQEKPSGGGSGSGRKRKVGPVDHDLVLRAMSRALEVTELAYLDITDKLLASNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKEVDSNVESGSKGDRGSNTESIVEECLALGEGESAIKLGNEGTAQEMRLAALQLSTDHSTSIEEEVIRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEYIGTAPYISCSPSLRHHRLYPTDQFLILSSDGLYQYLTNEEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0851 771 MobiDBLite consensus disorder prediction 445 469 - -
Lal16g0851 771 SMART PP2C_4 243 757 IPR001932 -
Lal16g0851 771 PANTHER PROTEIN PHOSPHATASE 2C 29 18 769 - -
Lal16g0851 771 MobiDBLite consensus disorder prediction 53 83 - -
Lal16g0851 771 PANTHER PROTEIN PHOSPHATASE 2C 18 769 IPR015655 GO:0004722|GO:0006470
Lal16g0851 771 MobiDBLite consensus disorder prediction 53 69 - -
Lal16g0851 771 ProSiteProfiles PPM-type phosphatase domain profile. 238 759 IPR001932 -
Lal16g0851 771 SUPERFAMILY PP2C-like 256 760 IPR036457 -
Lal16g0851 771 Pfam Protein phosphatase 2C 574 727 IPR001932 -
Lal16g0851 771 CDD PP2Cc 473 759 IPR001932 -
Lal16g0851 771 Gene3D - 231 766 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0851 Lal-Chr16 5530551 5539036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0851 1 771 PP2C-type Phosphatase Gene Family AT2G35350 56.350 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0851 - - mtr:MTR_4g098650 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0851 16 5530551 5539036 Lal16g0851 16 5530551 5539036 ECH
Lal16g0851 16 5530551 5539036 Lal23g0776 23 10285043 10290845 PCT
Lal23g0776 23 10285043 10290845 Lal16g0851 16 5530551 5539036 PCT