Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0844 ATGATTGGCATTGAAACCAAAAAACACTCACTCACTTCTCATCCTCTCTGCTCTGCTCTGCTGCTGTGCTCAGTTGTAAAAGTTCCCTCACAGCACACAAAGAAATCACACAACTCATTACCCTTTCTCTCTTCTCTTCACACTAAAATGCAACTCTTCTTCTTCTTCTTCCTCTTACCCCTCTACCTCCTCCACTTCCACCACTCCGCCACCGCCCACACCCTCTCCGATTACCATTCCCTCCTCTCTTTCAAATCCACCTCCGTCACCTCCGACCCAACCCATTTCCTCTCCTCATGGACCCCATCAACCCCTTACTGCACCTGGCCAGGTATAACCTGCGACTCTTTAAACCGCCACGTCATCACTCTCAACCTCACCTCTCTTTCCCTCTCCGGCACCATCACCACCCTCCACCTCCCTTTCCTCACCACTCTCTCCCTCGCCGACAACCATTTCTATGGCCCTATCCCTTCCTCTCTCTCCTCACTCTCTTTCCTCAAATACCTTAATCTCTCTAATAACAACTTCAACTCCACTTTCTCTCCACAACTCTCTCAACTTCAAAATCTTCAAGTCCTCGATTTTTATAATAACAACATGACTGGTCCGCTTCCCGTTTCGGTTGCCAATATGACAAATTTAAAGCACTTGCACCTCGGTGGTAACTTTTTCTCCGGTCAGATCCCGCCGGAGTATGGAAAATGGCGAAATATTGAATACCTTGCTGTGTCCGGCAATGAGCTTACCGGAACTATCCCTCCGGATATCGGTAACTTGAAGTCGTTGAAAGAGCTTTATATTGGGTACTATAATACTTATTCCGGTGGGATTCCGCCGGAGATCGGAAACTTGTCGGAGTTAGTGCGTTTTGATGCTGCTTATTGTGGACTCTCCGGTGAGATTCCGGCGGAGATAGGGAAGCTTCAGAAACTTGATACGTTGTTTCTTCAAGTTAATGCGCTTTCTGGGTCTTTAACTTCTGAGCTTGGGAACTTGAAGAACTTAAAATCTATGGATTTGTCAAACAATGCACTTTCTGGCGAGGTTCCGGCGAGTTTCTCATTGCTAAAGAACTTAACTTTGCTGAACCTATTTAGGAACAAGCTTCATGGGTCGATACCTGAGTTCATTGGTGAGCTTCCAAATTTGGAAGTGTTGCAACTTTGGGAGAATAATTTCACTGGGAGCATTCCAAAGAGTTTAGGGCAAAATGGGAAACTCACACTTGTTGATCTTTCTTCTAACAAGTTAACTGGGTCACTTCCTCCTGATTTGTGTTTTGGGCACAAGCTTCAGACTTTGATTACTCTTGGGAATTTCCTCTTTGGCCCTATTCCTGATTCACTTGGAAAGTGTGAATCTTTGACTAGGATTCGTATGGGAGATAGTTTTTTGAATGGTTCTATCCCTAAAGGGCTTTTTGGTCTTCCAAAATTAACCCAAGTTGAGCTTCAGGATAATTTTCTATCAGGAACTTTTCCTGACTCTGGTTCTATATCTCCAAATCTTGGCCAAATTACTCTTTCTAATAACCAGCTCTATGGGCCTTTACCACCTACTATTGGTAACTTCACCAGCATGCAAAAGCTTCTTCTTGATGGCAATAAGTTTTCAGGCCCTATCCCTCCTCAGATTGGGAGGTTGCAACAGCTTTCAAAGATGGATTTTAGCCATAATAAGTTTTCTGGTTCTATTGCTAAAGAAATCAGTCATTGTAAGTTGTTGACTTTTGTTGATCTTAGCCGCAATGAGCTCTCTGGTGAGATCCCTAAGGAGATTAAGAATATGAGAATATTGAATTACTTGAACATTTCAAGAAACCATTTAGTTGGTACTATTCCTAGGTCTATTGCTGCCATGCAAAGTTTAACTTCAGTTGATTTTTCATATAATAATCTATCTGGTTTGGTTCCTGGTACTGGCCAATTCAGCTATTTTAACTACACCTCTTTCCTCGGCAATCCTCAACTTTGTGGCCCTTATTTGGGTCCTTGCAAAGAAGGGGTTGCCAATGGCTCTCAGCAGCCTCATGTTAAAGGACCGTTGTCTCCTTCTTTGAAGTTATTGCTTGTTATTGGCTTGCTTGTGTGCTCCATTGCATTTGCGGTTGTGGCGATACTCAAAGCTAGGTCGTTGAAGAAGGCTGGCACTCGTGTGTGGAAATTGACTGCATTCCAACGATTGGATTTCACGGCTGATGATGTTTTGGACTCCTTGAAGGACGACTACATTATAGGCAAAGGAGGTGCAGGTATTGTGTATAAGGGTGCAATGCCGAATGGGGATCTTGTTGCTGTGAAAAGGTTGCCAGCTATGAGCAGAGGCTCTTCCCATGACCATGGTTTTAATGCTGAGATACAGACGTTGGGTCGAATTCGACACAGGCACATTGTTAGATTGTTGGGTTTCTGCTCAAACCATGAGACAAATCTTTTGGTCTATGAATACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGGGGTCATTTACTTTGGGACACAAGGTATAAAATTGCTGTTGAGGCTGCAAAGGGTCTTTGCTATCTACACCATGATTGTTCCCCGCTTATTGTCCATCGTGATGTGAAGTCGAACAATATCCTTTTGGATTCCAACTTTGAAGCCCATGTTGCCGATTTTGGTCTTGCTAAGTTCCTTCATGATTCTGGAACATCTGAATGCATGTCTGCTATTGCCGGTTCATATGGATACATAGCACCAGAATATGCCTACACATTGAAAGTTGATGAGAAAAGCGATGTCTACAGCTTCGGTGTGGTTCTCTTAGAGCTTGTGACCGGAAGGAAACCAGTTGGGGAATTTGGTGATGGTGTGGACATTGTGCAATGGGTGAGGAAGTTGACAGACTCAAACAAGGAAGGAGTTCTAAAAGTTCTTGATCCTAGACTTCCCTCAGTTCCGACCGAAGAGGTTATGCACGTCTTCCATGTAGCCATGCTGTGTGTTGAAGAACAGGCGGTTGAGAGACCAACTATGCGCGAAGTTGTTCAAATCTTGACCGAGCTTCCAAAGCCACCTGGATCAAAACATGGAGACTTGACATTCACTGAATCTTCTTTGACATCGTCAAACGGTTCGGAGTCTCCAACTACAGCATCATCTAAGGAACCTAATGATCTTGAACATCCTCCTAAGTCATCATCACCTGATCTTCTTCTTAGCATTTGA 3204 0.4379 MIGIETKKHSLTSHPLCSALLLCSVVKVPSQHTKKSHNSLPFLSSLHTKMQLFFFFFLLPLYLLHFHHSATAHTLSDYHSLLSFKSTSVTSDPTHFLSSWTPSTPYCTWPGITCDSLNRHVITLNLTSLSLSGTITTLHLPFLTTLSLADNHFYGPIPSSLSSLSFLKYLNLSNNNFNSTFSPQLSQLQNLQVLDFYNNNMTGPLPVSVANMTNLKHLHLGGNFFSGQIPPEYGKWRNIEYLAVSGNELTGTIPPDIGNLKSLKELYIGYYNTYSGGIPPEIGNLSELVRFDAAYCGLSGEIPAEIGKLQKLDTLFLQVNALSGSLTSELGNLKNLKSMDLSNNALSGEVPASFSLLKNLTLLNLFRNKLHGSIPEFIGELPNLEVLQLWENNFTGSIPKSLGQNGKLTLVDLSSNKLTGSLPPDLCFGHKLQTLITLGNFLFGPIPDSLGKCESLTRIRMGDSFLNGSIPKGLFGLPKLTQVELQDNFLSGTFPDSGSISPNLGQITLSNNQLYGPLPPTIGNFTSMQKLLLDGNKFSGPIPPQIGRLQQLSKMDFSHNKFSGSIAKEISHCKLLTFVDLSRNELSGEIPKEIKNMRILNYLNISRNHLVGTIPRSIAAMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPQLCGPYLGPCKEGVANGSQQPHVKGPLSPSLKLLLVIGLLVCSIAFAVVAILKARSLKKAGTRVWKLTAFQRLDFTADDVLDSLKDDYIIGKGGAGIVYKGAMPNGDLVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLLWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLHDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKLTDSNKEGVLKVLDPRLPSVPTEEVMHVFHVAMLCVEEQAVERPTMREVVQILTELPKPPGSKHGDLTFTESSLTSSNGSESPTTASSKEPNDLEHPPKSSSPDLLLSI 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0844 1067 MobiDBLite consensus disorder prediction 1024 1049 - -
Lal16g0844 1067 SMART serkin_6 740 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0844 1067 Pfam Leucine rich repeat N-terminal domain 76 115 IPR013210 -
Lal16g0844 1067 MobiDBLite consensus disorder prediction 1014 1067 - -
Lal16g0844 1067 SUPERFAMILY RNI-like 124 442 - -
Lal16g0844 1067 Gene3D Ribonuclease Inhibitor 272 377 IPR032675 -
Lal16g0844 1067 SUPERFAMILY L domain-like 407 666 - -
Lal16g0844 1067 ProSiteProfiles Protein kinase domain profile. 740 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0844 1067 Gene3D Phosphorylase Kinase; domain 1 711 817 - -
Lal16g0844 1067 Pfam Leucine rich repeat 167 223 IPR001611 GO:0005515
Lal16g0844 1067 SUPERFAMILY Protein kinase-like (PK-like) 736 1011 IPR011009 -
Lal16g0844 1067 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Lal16g0844 1067 SMART LRR_typ_2 212 236 IPR003591 -
Lal16g0844 1067 SMART LRR_typ_2 381 405 IPR003591 -
Lal16g0844 1067 SMART LRR_typ_2 164 188 IPR003591 -
Lal16g0844 1067 SMART LRR_typ_2 525 549 IPR003591 -
Lal16g0844 1067 SMART LRR_typ_2 621 644 IPR003591 -
Lal16g0844 1067 SMART LRR_typ_2 333 356 IPR003591 -
Lal16g0844 1067 SMART LRR_typ_2 406 429 IPR003591 -
Lal16g0844 1067 Gene3D Ribonuclease Inhibitor 181 271 IPR032675 -
Lal16g0844 1067 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 54 1050 - -
Lal16g0844 1067 Pfam Protein tyrosine and serine/threonine kinase 745 1011 IPR001245 GO:0004672|GO:0006468
Lal16g0844 1067 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 54 1050 - -
Lal16g0844 1067 Gene3D Ribonuclease Inhibitor 76 180 IPR032675 -
Lal16g0844 1067 Gene3D Ribonuclease Inhibitor 378 672 IPR032675 -
Lal16g0844 1067 Gene3D Transferase(Phosphotransferase) domain 1 818 1023 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0844 Lal-Chr16 5464810 5468856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0844 65 1041 Receptor kinase-like Gene Family AT5G65700 78.499 0.0 1543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal16g0844 PK_Tyr_Ser-Thr 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0844 - - gmx:100499646 1610.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0844 16 5464810 5468856 Lal15g0813 15 5934347 5938237 LSH
Lal16g0844 16 5464810 5468856 Lal15g0813 15 5934347 5938237 PCT
Lal16g0844 16 5464810 5468856 Lal23g0785 23 10383888 10387812 PCT
Lal15g0813 15 5934347 5938237 Lal16g0844 16 5464810 5468856 PCT
Lal23g0785 23 10383888 10387812 Lal16g0844 16 5464810 5468856 PCT