Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0843 ATGCAGCAACACTTTCTAAACCCTTTCTTCTCATTACTACTATTACTATGCATAACTAGTAACAATATTTCATTAGGTTTATCTCATTCTCTCTACAAAGACACACAAATTCTACTAAGCATTAAGAACACCCAGTTGCAAGATAAAAACAACATTCTTAAAGACTGGGTTCCAAACAGCAACAACCCATGTAACTGGACTGGTATTACTTGCGACACACGAAACATCTCTGTTGTCTCAATTGACCTATCACATTTAAACCTCTATGGTGAGTTCCCTTGTGGTTTCTGTTACATTCACACTCTCCAAAACCTTTCACTTGGATATAACTATCTGGGTAACACAATTAACACACGCTCTCTTTCTATATGTTCTCACCTTCTTGTGTTAGACCTTATTCAAAACTTATTCATTGGTGAGTTACCGGAGTTTCCATCGGAGTTTAGTGCAATTAGAGTGTTGGATCTTTCATATAACAACTTCTCCGGTGACATTCCAGCGAGTTTTGGCCGGTTTCCTCAACTTAAGGTTCTAAAATTAGTCTCAAATCTATTTAGTGGAATAGTTCCTTCATTCTTAGGGAACCTCAGTGCCTTAAGAAATTTGGAACTTGGTTACAATCCCTTCAAGGAAGGTCCTTTACCTTGGCAACTTGGAAATCTTTCCAAACTTGAAACTTTGTACCTTTCCAATGCTAATCTCATTGGAAGTATACCAGACTCAATAGGGAACCTTGTCTCACTCAAGAACCTTGATTTGAGTTCCAACTATCTCTCTGGTGAAATCCCAAAGAGCATTTCTGGTTTGAAAAATGTGGAGCAAATTGAGCTTTTTAATAACAATCTTCAGGGTGAGTTACCAGAAAGTTTAGGAAATCTCACTAGTTTGCTTCGTATGGACCTTGGACAGAACAACCTCACAGGAAAACTTCCTCACACAATTGGTTCATTGTGTCTCACTTCTCTTCGGTTAAATGAAAATCTATTCTATGGAGAAATTCCATCAAGTTTGGCCTTAAACCCGAATTTACGACATCTTGCACTCTTTATTAACAACTTCACAGGGAAACTACCACAGCATCTTGGCTTAAATTCTGACTTGGAAGATTTTGATGTGTCTAACAATGAATTAACAGGTGAATTGCCTAAGCATCTTTGTCAAAGGAAAAAGCTTCAGAGTCTTGTAATCTTCAATAACAAGTTTTCAGGAACACTGCCTGCACAATTTGGCGAATGTCATTCACTCACTGTTATCAGCATGGAAAACAATGAGCTTTCTGGTGAAGTGCCGTCAAGTTTTTGGATCCACCCTGGCTTTGAGACTCTTAAAATGCAGTATAACAGGTTTTCAGGTTCAATCTCTAATTCAATTTCCAATGCGAAGAGACTTGCCAAACTTCAGTTGCAAGGTAACAATTTTTCTGGAATGTTACCAATTGGAATTTGTGAACTTGATAGGCTAATGAAGTTTGATGTTAGCAAAAACTTGTTAACCGGTGAAGTTCCTGCTTGCATAACTAGATTGAAGAAGTTAGAATTTCTGAGGCTGCAAGAAAATATGTTCACAGGTCCAATTCCCTCTAATTTCAGTTTTTGGCATGAGTTGACAGAATTGAACTTGTCCTATAACCAATTCTCTGGCACAATTCCATCACAACTTAGTTACTTGCCGGATTTAACATACCTTGATCTCTCCATGAATTCACTCACTGGGAATGTTCCACCAGAGTTAGTCAATCTCGAACTCAGTGAATTCAATGCATATGGCAATAAACTGTATGGAGAGGTGCCTTATGTTTTCAGCAACCCTGTTTTCTTGTCTGGTCTAAGGGGAAATCCTGGTCTATGCAGCCCAGTAATAAAGGAATTTCCTCCTTGTCCAAAACAAAGACCCTATTCTCTCATTGCTGTTATCATTTTTGCAGCTTGTTTTTTAATCTTCATGGGTTCTGTTCTGTGGTTTTTGAAGAGAAAGTTTATCTTTTTTAATGGTAAGTCCTATAAGCCTTCTTACAAGACAACTAATTTTCAAATTGTTGGGTTTAGTGAAGAAGACATTGTTCCATTCTTAACAAGGGAGAACCTCATTGGCAGTGGGAGTTCGGGGCAAGTATATAAGGTGAATCTAAAGAATGGGGAGTTTGTTGCGGCAAAAAAACTATGGGGAGGAACACGAAAACTTGATACAGAATCAGTGTTCAAGTCTGAGATTGAGATATTGGGTAGAATAAGACATGCTAATATTGTGAAACTTTTGTTTAGTTGCAGTGCTGATGATGACTTAATGGTTTTGGTTTATGAGTACATGGAGAAAGGTAGCTTAGGTGATGTTTTGCACGTTAACAAGTGTGAGGAGTTGAGAGAGTGGTCCACAAGGTTCAACATTGCTGTTGGTGCAGCTCAAGGGTTGGCTTATTTGCATCATGATTGTGTTCCCCCTATACTTCACAGAGATGTCAAGAGTAATAACATATTGCTGGACCAAGATTTTTCGCCTTATGTCGCGGATTTTGGGCTGGCTAAGACCCTGAAGCATGAAGAAGGTGGCATTGGTGCTATGTCTAGAATTGCTGGATCATATGGTTACATTGCTCCAGAGTATGGTTACACACTTAAAGTGACTGAGAAGGGTGATGTGTATAGTTTTGGTGTGGTGCTGATGGAATTGATTACAGGGAAGAGGCCTAATGACCCTTCTCTTGGTGACAACATGGATATAGTGAAGTGGATTACTGAGACTGCATTTTCATCTGCTGAGGATCATCCAATTGATGTGGCTCATATTATAGACCCAATGCTGAACCTGGGTATTTGTGATTATGAAGAGATTGAGAATGTTCTAAATGTAGCTCTACTTTGCACCACATCATTTCCCATGAATAGACCTTCAATGAGAAGGGTGGTTGAATTGTTGAAGGAACATAAACTGGCTCGTCACAACTAA 2943 0.388 MQQHFLNPFFSLLLLLCITSNNISLGLSHSLYKDTQILLSIKNTQLQDKNNILKDWVPNSNNPCNWTGITCDTRNISVVSIDLSHLNLYGEFPCGFCYIHTLQNLSLGYNYLGNTINTRSLSICSHLLVLDLIQNLFIGELPEFPSEFSAIRVLDLSYNNFSGDIPASFGRFPQLKVLKLVSNLFSGIVPSFLGNLSALRNLELGYNPFKEGPLPWQLGNLSKLETLYLSNANLIGSIPDSIGNLVSLKNLDLSSNYLSGEIPKSISGLKNVEQIELFNNNLQGELPESLGNLTSLLRMDLGQNNLTGKLPHTIGSLCLTSLRLNENLFYGEIPSSLALNPNLRHLALFINNFTGKLPQHLGLNSDLEDFDVSNNELTGELPKHLCQRKKLQSLVIFNNKFSGTLPAQFGECHSLTVISMENNELSGEVPSSFWIHPGFETLKMQYNRFSGSISNSISNAKRLAKLQLQGNNFSGMLPIGICELDRLMKFDVSKNLLTGEVPACITRLKKLEFLRLQENMFTGPIPSNFSFWHELTELNLSYNQFSGTIPSQLSYLPDLTYLDLSMNSLTGNVPPELVNLELSEFNAYGNKLYGEVPYVFSNPVFLSGLRGNPGLCSPVIKEFPPCPKQRPYSLIAVIIFAACFLIFMGSVLWFLKRKFIFFNGKSYKPSYKTTNFQIVGFSEEDIVPFLTRENLIGSGSSGQVYKVNLKNGEFVAAKKLWGGTRKLDTESVFKSEIEILGRIRHANIVKLLFSCSADDDLMVLVYEYMEKGSLGDVLHVNKCEELREWSTRFNIAVGAAQGLAYLHHDCVPPILHRDVKSNNILLDQDFSPYVADFGLAKTLKHEEGGIGAMSRIAGSYGYIAPEYGYTLKVTEKGDVYSFGVVLMELITGKRPNDPSLGDNMDIVKWITETAFSSAEDHPIDVAHIIDPMLNLGICDYEEIENVLNVALLCTTSFPMNRPSMRRVVELLKEHKLARHN 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0843 980 SUPERFAMILY Protein kinase-like (PK-like) 686 971 IPR011009 -
Lal16g0843 980 Gene3D Phosphorylase Kinase; domain 1 678 768 - -
Lal16g0843 980 SMART serkin_6 690 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0843 980 SUPERFAMILY L domain-like 317 620 - -
Lal16g0843 980 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 12 976 - -
Lal16g0843 980 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 976 - -
Lal16g0843 980 ProSiteProfiles Leucine-rich repeat profile. 223 245 IPR001611 GO:0005515
Lal16g0843 980 Pfam Leucine rich repeat 223 282 IPR001611 GO:0005515
Lal16g0843 980 Pfam Leucine rich repeat 151 208 IPR001611 GO:0005515
Lal16g0843 980 Gene3D Ribonuclease Inhibitor 30 211 IPR032675 -
Lal16g0843 980 ProSiteProfiles Protein kinase domain profile. 690 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0843 980 Gene3D Ribonuclease Inhibitor 212 316 IPR032675 -
Lal16g0843 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Lal16g0843 980 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Lal16g0843 980 ProSitePatterns Protein kinases ATP-binding region signature. 696 719 IPR017441 GO:0005524
Lal16g0843 980 SUPERFAMILY L domain-like 32 313 - -
Lal16g0843 980 Pfam Protein kinase domain 692 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0843 980 Gene3D Transferase(Phosphotransferase) domain 1 769 979 - -
Lal16g0843 980 SMART LRR_typ_2 221 244 IPR003591 -
Lal16g0843 980 SMART LRR_typ_2 172 195 IPR003591 -
Lal16g0843 980 SMART LRR_typ_2 245 269 IPR003591 -
Lal16g0843 980 SMART LRR_typ_2 293 317 IPR003591 -
Lal16g0843 980 SMART LRR_typ_2 556 580 IPR003591 -
Lal16g0843 980 Gene3D Ribonuclease Inhibitor 317 627 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0843 Lal-Chr16 5454948 5458459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0843 34 975 Receptor kinase-like Gene Family AT5G65710 53.196 0.0 966
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal16g0843 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0843 - - gmx:100813889 1232.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0843 16 5454948 5458459 Lal23g1273 23 13815352 13819516 LSH