Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0822 ATGAGCTCCAGCGGCGGCGAATCAACATCTTCCGATAAGCAAAAGGAGAAGGCTAGGGTGAGCCGCACCTCCTTGATACTCTGGCACGCTCACCAAAACGACGCCGCTTCGGTGCGTAAGCTATTGCAAGAGGATCCCTCTCTTGTTAACGCCAGAGATTACGACAACCGTACTCCTCTTCACGTGGCTTCCCTCCATGGCTGGATCGACGTTGCTAACTGCTTAATCGAATTCGGAGCTGACGTCAACGCTCAAGATCGGTGGAAAAACACTCCTCTGGCTGATGCGGAAGGAGCTAAACGAAATAGTATGATCCAGCTTTTGAAAACACACGGAGGCTCGTCTTATGGTCAAAATGGGAGCCATTTCGAACCTAACACAGTTCCACCTCCATTGCCGAACAAGTGTGATTGGGAAGTTGACCCATCTGAGCTTGATTTCTCTAATTCAGCACGTATTGGAAAGGGCTCTTTCGGTGAGATTTTGAAAGCCCATTGGCGTGGAACACCAGTTGCTGTCAAACGCATTCTTCCCTCTCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCACGAGGTCAATTTGTTAGTGAAGCTTCGACACCCCAATATTGTTCAGTTTCTTGGAGCTGTTACTGACAGAAAGCCACTTATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGAAAAAGGTTCACTAAATCCTGCATCCGCTATAAACTTTTCCATGGATATTGCTAGAGGAATGGCATATCTTCATAATGAACCCAATGTTATAATTCATCGAGACCTAAAGCCAAGGAATGTGCTTTTAGTCAATTCTAGTGCCGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCAAGGTCCAAAGTTCTCATGATGTATACAAGATGACTGGTGAAACAGGAAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGATGTGTTCTCTTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCACCCTTTGCAACTTATGAACCTTACGATGGAGCCAAACGGGCAGCAGAAGGACACAGGCCTACTATCCGCGCAAAGGGATATACCCCTGAACTGATAGAGTTAACAGAGCAGTGTTGGGCTGCTGACATGAATCAGAGACCTTCCTTCATAGACATCCTTAAGCGGCTTGAAAAGATCAAGGAAAATTTACCATCAGATCATCATTGGCACTTGTTCTCTTCGTAA 1272 0.4489 MSSSGGESTSSDKQKEKARVSRTSLILWHAHQNDAASVRKLLQEDPSLVNARDYDNRTPLHVASLHGWIDVANCLIEFGADVNAQDRWKNTPLADAEGAKRNSMIQLLKTHGGSSYGQNGSHFEPNTVPPPLPNKCDWEVDPSELDFSNSARIGKGSFGEILKAHWRGTPVAVKRILPSLSEDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKEKGSLNPASAINFSMDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFATYEPYDGAKRAAEGHRPTIRAKGYTPELIELTEQCWAADMNQRPSFIDILKRLEKIKENLPSDHHWHLFSS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0822 423 SUPERFAMILY Protein kinase-like (PK-like) 146 418 IPR011009 -
Lal16g0822 423 SMART serkin_6 147 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0822 423 ProSitePatterns Protein kinases ATP-binding region signature. 153 174 IPR017441 GO:0005524
Lal16g0822 423 ProSiteProfiles Ankyrin repeat profile. 55 87 IPR002110 GO:0005515
Lal16g0822 423 PRINTS Tyrosine kinase catalytic domain signature 222 235 IPR001245 GO:0004672|GO:0006468
Lal16g0822 423 PRINTS Tyrosine kinase catalytic domain signature 260 278 IPR001245 GO:0004672|GO:0006468
Lal16g0822 423 PRINTS Tyrosine kinase catalytic domain signature 376 398 IPR001245 GO:0004672|GO:0006468
Lal16g0822 423 Pfam Ankyrin repeats (many copies) 41 93 IPR002110 GO:0005515
Lal16g0822 423 SUPERFAMILY Ankyrin repeat 26 123 IPR036770 -
Lal16g0822 423 CDD STKc_MAP3K-like 153 405 - -
Lal16g0822 423 SMART ANK_2a 55 84 IPR002110 GO:0005515
Lal16g0822 423 ProSiteProfiles Ankyrin repeat region circular profile. 55 87 - -
Lal16g0822 423 PIRSF ILK 1 423 - -
Lal16g0822 423 Pfam Protein tyrosine and serine/threonine kinase 150 405 IPR001245 GO:0004672|GO:0006468
Lal16g0822 423 Gene3D Transferase(Phosphotransferase) domain 1 227 419 - -
Lal16g0822 423 ProSiteProfiles Protein kinase domain profile. 147 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0822 423 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 8 415 - -
Lal16g0822 423 Gene3D Phosphorylase Kinase; domain 1 131 226 - -
Lal16g0822 423 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 415 - -
Lal16g0822 423 Gene3D - 2 126 IPR036770 -
Lal16g0822 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0822 Lal-Chr16 5308678 5313456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0822 8 423 MAP Kinase Kinase Kinase AT1G14000 85.337 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lal16g0822 PK_Tyr_Ser-Thr 1.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0822 - - adu:107481197 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0822 16 5308678 5313456 Lal16g0822 16 5308678 5313456 ECH
Lal16g0822 16 5308678 5313456 Lal15g0787 15 5673299 5678812 LSH
Lal16g0822 16 5308678 5313456 Lal23g0810 23 10608833 10613092 LSH