Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0803 ATGGCTCTTATAATTTACTTTGTGCTTTTCATGGCTCTATGTATAAGGCATTCTAGTGCAAGTTACTGTTTATGCAAAGATGGAGTTGACAGTGATGAGCTTCAGAAAGCATTAGACTATGCATGTGGATTTGGAGCTGATTGTGGTCCAATTCAACCAAATGGACCTTGTTTTGAACCCAACACAGTGAAAGATCACTGTGACTATGCTGTTAATAGCTATTACCAAAATATGCATCTTGTTGGAGGAACATGTGATTTTGCTGGCGCCGCCACAACTAGTCCAACTCTACCTGCTCAAATTTCTTGCGGATGTGTTTACGCCCCAGGTCCTGGGTACGCTAATGTTTTATTTATCTATTTTGGGTCTTCTTGCAGTGACTCAGGAACAAACCCTAAACCACCATCAGTTGAAACACCAACAACACCACCATCAGTTGAAACACCAACAACACCAAGTACAAGAACTCCAGGCACACCCTCTTTGGCCCCACCAACCGGTACAGATGGCACAATACCAGATGTGTTTGGAACAACTACACCTAAAGATAGAAATGATAGTTCCAACGTTAAAGGCATCAACACCAAGTTATTATTGCTCCTCATTCTTGCTATCTCCTGGATAGCATTGAGGGCCTAA 639 0.4225 MALIIYFVLFMALCIRHSSASYCLCKDGVDSDELQKALDYACGFGADCGPIQPNGPCFEPNTVKDHCDYAVNSYYQNMHLVGGTCDFAGAATTSPTLPAQISCGCVYAPGPGYANVLFIYFGSSCSDSGTNPKPPSVETPTTPPSVETPTTPSTRTPGTPSLAPPTGTDGTIPDVFGTTTPKDRNDSSNVKGINTKLLLLLILAISWIALRA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0803 212 MobiDBLite consensus disorder prediction 130 189 - -
Lal16g0803 212 PANTHER BETA-1,3 GLUCANASE 1 200 IPR044788 -
Lal16g0803 212 SMART X8_cls 21 107 IPR012946 -
Lal16g0803 212 Gene3D - 12 108 - -
Lal16g0803 212 MobiDBLite consensus disorder prediction 148 189 - -
Lal16g0803 212 Pfam X8 domain 22 92 IPR012946 -
Lal16g0803 212 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 4 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0803 Lal-Chr16 5197805 5198999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0803 17 104 Glycoside Hydrolase AT3G13560 44.944 4.32e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0803 - - lang:109350426 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0803 16 5197805 5198999 Lal15g0773 15 5530488 5531900 LSH
Lal16g0803 16 5197805 5198999 Lal23g0828 23 10734683 10736211 LSH
Lal16g0803 16 5197805 5198999 Lal6g0797 6 5356527 5358825 PCT
Lal16g0803 16 5197805 5198999 Lal18g0916 18 11970065 11972127 PCT
Lal6g0797 6 5356527 5358825 Lal16g0803 16 5197805 5198999 PCT
Lal18g0916 18 11970065 11972127 Lal16g0803 16 5197805 5198999 PCT