Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0790 ATGAAGCTGAGAACGGAAATAATCATCCCCATTTCTCATCTATTGGCGTTGTTTTTGTGCATCACATTTTCTTCTTCTTCTTCTTCGATACCCAGTAACCAATTCCTCGGAATTTCTCCCCAAGATGAAAAGTATTACAAGTCTTCTGATGTAATAAAATGTAAAGATGGATCTAGAAAATTCACCATACAACAACTCAACGACAATTTTTGTGATTGTCTTGATGGCACCGATGAGCCTGGTACATCAGCATGTCCTGGTGGAAAATTTTATTGTCGGAATGCAGGGCATGTTCCTGTTTACCTCTTTTCGTCGAGAGTGAATGATGGAATATGCGACTGCTGTGATGGAACCGATGAATATGATGGTAAAGTGAAGTGCCCAAATACTTGCTGGGAGTCTGGGAAAGTTGCTCGAGAGAAGCTGAAGAAAAAGATTGAAACATATCAAGAGGGTGTTAAATTGCGAAAACAAGAAATTGAACAAGCTAAATTAGCTCTGGAGAAGGATCAGTCTGAACTTTCAAAACTGAAAAAAGAAGAAAGTACCCTTAAAGGGCTTGTGAAACAGCTTAAGGGGGGGAAATACAAATGTTATGGTTCATCATTCTTACAACAATTCTTTGATAAACTCACTTTATCTCCCATTGAAGAGCATAAAGAACAAATAGAAAAGGCAGAGGAGAAGGAGCGTTTACAGAAGGAAGAAGAAGAGAAGCAGAAAAAGGAGGCTGAAAAGAATGTTACTGGAGAAAATTTTAAAGCTGGTGACGAGGATACAGGGCATAGAAATGAAGCTGACAAGCATGTAGATGTTGAAGAAAATGATGTCACAAGTAACCATGATGAAAGCGGAACACTACATGATTCTTCTGCAGACCAGGTTGAAGCTGGGGACAAGTTAGCGGATCCACATGACAATTATGATGGAGCCAGTGATAGTCCTGGAAGTGAAGGATCTTTGCTTTATGAAGAGGAAGAGATTGAAAAAGAAGCTGAGGGAGAACCTGATGTTAAATCTGACACCGACGTTAAAATTGAAAAGAAAGAGTCACCTGATGAAATCATCAATAAGGGAAATGATGCATCTGAAAATACTGAGGGATTATCAAAGGAGGAATTGGGACGGCTTGTTGCTTCTCGGTGGACAGGAGAAAATACTGATAAGCAAAGCGCTGAAGCTGATGCTGCATCAGACAAAGAAGATCAGGAAGATATTCCGAAGGAGACAAATAATGAGCAACATGATGGCTATGCTTCTGAAACTGATGATGACAGCAGCAAATATGAAGATGAAGACTTTCGAGAGGACGAGCATGATGACCCTAGTCCCTCTTACAAATCTGACACTGATGCTGAACCAGACTTGTCAGATGACACAACAGACAACCCTTCTTGGTTAGAGAAAATACAAAAATCTGTGCGGAACATTTTTCATGCTGTTAATTTATTCCAGACTCCAGTGAACCAGTCAGATGCTGCTCGTATACGCAAGGAATATGATGAGTCAAGTACCAAGTTGTCTAAACTACAGTCTAGAATATCGAGTCTGACACAAAAGCTAAAACAAGATTTTGGTCCAGCGAAGGAGTTTTATTCATTCTATGATCGTTGCTTTGAGAGCAAGCAGAACAAGTACACTTACAAAGTCTGCCCATATAAACAGGCTTCTCAGGAGGAGGGACATTCTTCCACTCGTTTGGGGAGCTGGGACAAATTTGAGGACTCATACAAATTAATGGTGTTTGCTAATGGTGATAACTGCTGGAATGGTCCTGATAGGAGTTTGAAGGTCAAGCTAAGATGCGGGTTGAAAAACGAGGTTACTGATGTTGATGAACCCAGCCGCTGCGAATATGTAGCTATATTATCTACCCCAGCCCTTTGTCACGAGGAAAAGCTAAAGGAGTTACAACACAAACTGGAGTTATTGAATTCGGAACCATCTGAAAAACACGACGAATTGTGA 1968 0.405 MKLRTEIIIPISHLLALFLCITFSSSSSSIPSNQFLGISPQDEKYYKSSDVIKCKDGSRKFTIQQLNDNFCDCLDGTDEPGTSACPGGKFYCRNAGHVPVYLFSSRVNDGICDCCDGTDEYDGKVKCPNTCWESGKVAREKLKKKIETYQEGVKLRKQEIEQAKLALEKDQSELSKLKKEESTLKGLVKQLKGGKYKCYGSSFLQQFFDKLTLSPIEEHKEQIEKAEEKERLQKEEEEKQKKEAEKNVTGENFKAGDEDTGHRNEADKHVDVEENDVTSNHDESGTLHDSSADQVEAGDKLADPHDNYDGASDSPGSEGSLLYEEEEIEKEAEGEPDVKSDTDVKIEKKESPDEIINKGNDASENTEGLSKEELGRLVASRWTGENTDKQSAEADAASDKEDQEDIPKETNNEQHDGYASETDDDSSKYEDEDFREDEHDDPSPSYKSDTDAEPDLSDDTTDNPSWLEKIQKSVRNIFHAVNLFQTPVNQSDAARIRKEYDESSTKLSKLQSRISSLTQKLKQDFGPAKEFYSFYDRCFESKQNKYTYKVCPYKQASQEEGHSSTRLGSWDKFEDSYKLMVFANGDNCWNGPDRSLKVKLRCGLKNEVTDVDEPSRCEYVAILSTPALCHEEKLKELQHKLELLNSEPSEKHDEL 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0790 655 MobiDBLite consensus disorder prediction 392 424 - -
Lal16g0790 655 MobiDBLite consensus disorder prediction 222 465 - -
Lal16g0790 655 ProSiteProfiles MRH domain profile. 536 631 IPR044865 -
Lal16g0790 655 Coils Coil 216 254 - -
Lal16g0790 655 Pfam Glucosidase II beta subunit-like protein 497 651 IPR036607 -
Lal16g0790 655 MobiDBLite consensus disorder prediction 439 454 - -
Lal16g0790 655 MobiDBLite consensus disorder prediction 222 307 - -
Lal16g0790 655 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 216 655 IPR039794 -
Lal16g0790 655 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 11 195 IPR039794 -
Lal16g0790 655 Coils Coil 493 520 - -
Lal16g0790 655 Gene3D - 531 629 IPR009011 -
Lal16g0790 655 PANTHER BNACNNG14010D PROTEIN 11 195 - -
Lal16g0790 655 PANTHER BNACNNG14010D PROTEIN 216 655 - -
Lal16g0790 655 Coils Coil 627 647 - -
Lal16g0790 655 SUPERFAMILY Mannose 6-phosphate receptor domain 540 630 IPR009011 -
Lal16g0790 655 Coils Coil 139 180 - -
Lal16g0790 655 MobiDBLite consensus disorder prediction 333 357 - -
Lal16g0790 655 Pfam Glucosidase II beta subunit-like 30 179 IPR028146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0790 Lal-Chr16 5130721 5139029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0790 26 655 Calmodulin-binding Proteins AT5G56360 57.209 0.0 625