Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0782 ATGTCAAGATTGAAAGTACTCACAGCCCTTGACACAGCAAAGACACAATACTATCACTTCAAGGCCATAATCATAGCAGGCATGGGGCTATTCACCGATGCCTATGATCTCTTCTCTATAACTCTCATCATCAAGATGATTGGAAGGATATATTACAGTGATCGCCACGGCGATCACAAACACCAGACACCGCCTTTCGTTGCTTCGGCCTTGGTGACGGTGGCGCTATTAGGCACGGCCATTGGTCAAGTTGTATTTGGAAGGATTAGTGACCTTAAAGGGCGCCGCCATGTCTACGGGCTTGCCTTAATGCTCATTGTCATTGGTTCCTTGGCTTGTGGTTTTTCCATTTGTACCTCTAGAACTTGCGTTCTCCTCTCTCTAGGCTTCTTCAGGTTCTTGTTAGGGTTGGGGATTGGTGGAGACTACCCTATATCTTCTACTATAATGTCTGAGTTTGCAAACAAAAAAACAAGAGGGTCTTTCATTGCGGCAGTGTTTTCCATGCAAGGGTTCGGGATATTAGCCAGCGCCATCGTCACAACGGTGGTATGTTCTATATTCCGCCGTGCCTCTGGCACGTCACCTCAAAAACCAACACCACAAGGGGCTGATATTGCATGGAGATTGATATTGATGATGGGTTCAATTCCAGCAGCTATGACTTATTACTGGCGGATGATGATGCCTGAAACTGCTAGGTACACAGCATTAGTGGAACAAAATGTGATGCAAGCAGCAAAGGATATGGAGAAAGTTCTTGATATCTCAATCAGTCAGATAACTGAAAATAATTCATTGTCACCAACACCGTATAAGTACTCTCTCCTTTCCAAAGAGTTCCTTCGTCGACATGGCCGTGATCTTTTTGCTTGTTCCTCTACTTGGTTTCTTCTGGACATTGTGTTCTATAGTAGCAACCTTTTCCAATATCAAATATACAAACGCTTCCTCAGAAACAAAAATAACGTTGATGTTTATCAAGAAGCTATCCAACTTTCCGGGCTCCAAGCTATTCTTGCTGTATGTTCCACCATTCCTGGTTACTTCTTCTCTGTCTATTTCATTGATCGTGTGGGAAGAGTCAAAATCCAAATGATGGGGTTTTTCTTCATGGGTTTGGTTTTTTTTGCTCTAGGGTTTCCTTATTACTCATATTGGACAAGTGGAGAGAAAGAAAATAATAAAGGTTTCGTAGTTCTCTATGGCCTTGCTTTCTTTTTTGCAAATTTTGGACCAAACACCACTACATTTATAGTCCCAGCTGAACTTTTCCCAGCTAGGTTTAGATCAACATGTCATGGCATTTCTGGAGCATCTGGTAAGGTTGGTGCAATCATTGGAAGTGTTGGATTTTTGTGGGCTTCACATAGAGAGAAAGAGGAAGGGTATCCTAAGGGAATTGGAATGCATGTTTCACTCATCATACTTGGAGGAGTGTGCATATTGGGAATGTTGATCACCTTTTTTTTCACTAAGGAAACAATGGGAAGGTCTTTGGAAGAGAATGAGACTGAGCCTCAAGATATTAAAATTGAAGAGATTAACATATGCTTGAACTGA 1563 0.421 MSRLKVLTALDTAKTQYYHFKAIIIAGMGLFTDAYDLFSITLIIKMIGRIYYSDRHGDHKHQTPPFVASALVTVALLGTAIGQVVFGRISDLKGRRHVYGLALMLIVIGSLACGFSICTSRTCVLLSLGFFRFLLGLGIGGDYPISSTIMSEFANKKTRGSFIAAVFSMQGFGILASAIVTTVVCSIFRRASGTSPQKPTPQGADIAWRLILMMGSIPAAMTYYWRMMMPETARYTALVEQNVMQAAKDMEKVLDISISQITENNSLSPTPYKYSLLSKEFLRRHGRDLFACSSTWFLLDIVFYSSNLFQYQIYKRFLRNKNNVDVYQEAIQLSGLQAILAVCSTIPGYFFSVYFIDRVGRVKIQMMGFFFMGLVFFALGFPYYSYWTSGEKENNKGFVVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGASGKVGAIIGSVGFLWASHREKEEGYPKGIGMHVSLIILGGVCILGMLITFFFTKETMGRSLEENETEPQDIKIEEINICLN 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0782 520 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 506 - -
Lal16g0782 520 Pfam Sugar (and other) transporter 24 504 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal16g0782 520 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal16g0782 520 Gene3D MFS general substrate transporter like domains 18 518 IPR036259 -
Lal16g0782 520 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 3 506 - -
Lal16g0782 520 CDD MFS_PhT 23 495 - -
Lal16g0782 520 SUPERFAMILY MFS general substrate transporter 10 504 IPR036259 -
Lal16g0782 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 496 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0782 Lal-Chr16 5057923 5061985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0782 1 506 Inorganic Solute Cotransporters AT1G76430 60.962 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0782 K08176 - gmx:100797683 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0782 16 5057923 5061985 Lal23g0851 23 10894119 10897826 LSH