Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0762 ATGTCTACGGACGAGATCACTAAGATGGAAGAAGGAGGAGTTAGGGAATCAGGGTTTTGTGGTTCTCCTGAGGTAGTTCAAATCATACAAAAGGTAATTGCAGAGGTGATTGGGACATACTTCTTAGTATTTGCAGGGTGTAGTGTGGTTGTTTTGAATAAATTGGAAGGGAGTAAAGGGACTATAACATTTCCTGGAATTTGTGTAGTATGGGGTCTAACGGTGATGATCTTAGTGTATGCTCTTGGTCACATCTCTGGTGCTCATTTTAATCCCGCAGTCACAGTGCCTTTGTATCTGATTGCACAGGTGCTAGGATCTATTCTTGCAAGTGGGACATTATACCTTCTATATGATGATTTAGATGAGAATAGTTACTTTGGAACGGTACCAGTAGGAGCTCACTTGAAATCTTTTATCTTAGAGATACTCACTTCCTTTCTCTTGATGTTTGTTGTCTCTGCTGTTTCCACAGACAATAGAGCGATTGGAGAATTGGCAGGGATTGCTGTTGGTATGACAGTCTTAATAGACGTCTTCATTGCAGGGCCTGTATCAGGAGCATCTATGAACCCAGCCAGAAGCCTTGGACCTGCAGTGGTGATGCACATTTTCGATGGGTTCTGGCTTTATATAGTTGGACCCTTTCTTGGGGCCATACTAGGTGCCTCAGCCTACAACCTAATTAGATTTACTGAGAAACCACTCAGGGAAATTGGTGCAAGCTCAACTATCCTCAAAAGCATGTCCAGAGTAAATACATTTAGGAGATAA 774 0.4225 MSTDEITKMEEGGVRESGFCGSPEVVQIIQKVIAEVIGTYFLVFAGCSVVVLNKLEGSKGTITFPGICVVWGLTVMILVYALGHISGAHFNPAVTVPLYLIAQVLGSILASGTLYLLYDDLDENSYFGTVPVGAHLKSFILEILTSFLLMFVVSAVSTDNRAIGELAGIAVGMTVLIDVFIAGPVSGASMNPARSLGPAVVMHIFDGFWLYIVGPFLGAILGASAYNLIRFTEKPLREIGASSTILKSMSRVNTFRR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0762 257 PANTHER AQUAPORIN NIP2-1 14 251 IPR034294 -
Lal16g0762 257 Pfam Major intrinsic protein 26 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal16g0762 257 SUPERFAMILY Aquaporin-like 27 237 IPR023271 -
Lal16g0762 257 Gene3D Glycerol uptake facilitator protein. 2 241 IPR023271 -
Lal16g0762 257 PRINTS Major intrinsic protein family signature 30 49 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal16g0762 257 PRINTS Major intrinsic protein family signature 71 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal16g0762 257 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal16g0762 257 PRINTS Major intrinsic protein family signature 172 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal16g0762 257 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal16g0762 257 PANTHER AQUAPORIN NIP4-1 14 251 - -
Lal16g0762 257 CDD MIP 30 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0762 Lal-Chr16 4908533 4910891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0762 4 250 Major Intrinsic Protein MIP AT5G37810 56.391 1.06e-100 293