Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0753 ATGAGAACCAAGTCCCTTTGCCATGTATTCTTATTATATGCTTTCCTTGTTCAAATTTATTTGCACAATGGGGTAATTGCTTCCCAAGATATAGCAAGATCAGAAAGTGAAGCACTAGAACAAGCAGAAGGATCCAAGAGGGAAACATTGGAAATCATCATAGGAGGTGGCAGTTATGCTCCTGCTCCTGCTCCTGCTCCATCACCTCAATGCCCTCCACCCCCTCCTCCGCCATGTCCACCACCACCCCAACCACCACTTAGCCGATTGGACAAAGCTCGTCTTGTGCTTCTAAATTTCACAAAATTCATTGATGACCCAAAAGGGTACACTAAAAACTGGAACCAGAACAACAAAGACACTTGCAAATTCAATGGTATAAGATGTGACACATATCCAAACACAAATGAGAAAGCAGTTGCTGGAATAGACCTTAACCAAGCTGGTATGTCAGGCCTTAACAAAACCTTTTTATCTCTTTCGGGTATTTTAGATAGGATACCTGAATTGACCTTTTTTCATGTGAACTCTAACAACTTCTCTGGTAGCATCCCAAACCAAATTACCAAGTTCCCTTTTTTCTACGAGTTAGATATTAGTAACAATAAACTGGTTGGTGAGTTTCCAAAACAAGTGCTTCAGGCCTTTCAACTAGTGTTCTTAGATCTTAGGTTCAACTATCTCTATGGGCCACTTCCACCACAATTGTTTCAGTTGCCACTAGATTTTATCTTCATCAACAACAATCAGTTCAGTCAATGTCTCCCTGATAATTTTGGCTCCACCCCTGCCAGGTACCTCACATTTGCAAACAACCAATTCTTGGGTCCAATCCCAAGGAGTATTGGCAATGCTTCAAAAACCCTGACTGAAGTGCTTTTCTTAGGGAACAAATTTGAAGGGTGCTTGCCATATGAAATTGGATACCTCAAAAAGGCTACAGTCTTTGATGTGAGCAAAAACGAATTAACTGGTCCAATCCCACTCTCTTTTGCTTGCTTGGAGAAAATTCAGTTCCTTAATTTGGCACACAACAAGTTTTATGGTTCAGTTCCAGAGATTGTGTGCCAGTTACCGGGCCTTCGCAACAACGGGAACCTTTCTTTATCAGACAACTACTTCACTGAGGTTGGACCAGAATGTCAGAAGCTGATAAAGTCCAATGTTTTGAACGTGAACAATAACTGCATTCCTGGGTTTCCAAATCAGAGATCATATAATGAGTGCTATAAGTTTTCATGCACAGTGAAATCTTGCCCCAATGAGAAGTATTTGAGTTACATCCCTTGTAAGGGACCCTGGGGGCAGAGCACTACCCTTGTTTCTGAGGCAAGTCCTTCACCACCTGATCCAGTAACTTATAAGTCTCTCAAACCACATCGGTTGAGACTGTAA 1395 0.4172 MRTKSLCHVFLLYAFLVQIYLHNGVIASQDIARSESEALEQAEGSKRETLEIIIGGGSYAPAPAPAPSPQCPPPPPPPCPPPPQPPLSRLDKARLVLLNFTKFIDDPKGYTKNWNQNNKDTCKFNGIRCDTYPNTNEKAVAGIDLNQAGMSGLNKTFLSLSGILDRIPELTFFHVNSNNFSGSIPNQITKFPFFYELDISNNKLVGEFPKQVLQAFQLVFLDLRFNYLYGPLPPQLFQLPLDFIFINNNQFSQCLPDNFGSTPARYLTFANNQFLGPIPRSIGNASKTLTEVLFLGNKFEGCLPYEIGYLKKATVFDVSKNELTGPIPLSFACLEKIQFLNLAHNKFYGSVPEIVCQLPGLRNNGNLSLSDNYFTEVGPECQKLIKSNVLNVNNNCIPGFPNQRSYNECYKFSCTVKSCPNEKYLSYIPCKGPWGQSTTLVSEASPSPPDPVTYKSLKPHRLRL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0753 464 Pfam Leucine rich repeat N-terminal domain 92 130 IPR013210 -
Lal16g0753 464 Gene3D Ribonuclease Inhibitor 263 428 IPR032675 -
Lal16g0753 464 MobiDBLite consensus disorder prediction 63 86 - -
Lal16g0753 464 PANTHER BNAC05G26270D PROTEIN 37 446 - -
Lal16g0753 464 MobiDBLite consensus disorder prediction 441 464 - -
Lal16g0753 464 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 37 446 - -
Lal16g0753 464 Gene3D Ribonuclease Inhibitor 90 262 IPR032675 -
Lal16g0753 464 SUPERFAMILY L domain-like 93 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0753 Lal-Chr16 4861905 4864118 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0753 89 409 Trihelix Transcription Factor Family AT1G12040 42.025 1.16e-72 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0753 - - cam:101512430 560.066