Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0745 ATGGCGACCGCACCCGCCCTCGAACAAGTCCAGTGCTTCGGCCGGAAGAAAACCGCCGTCGCCGTCACGTACTGCAAACGCGGGCGTGGCCTGATCAAGATAAACGGAAGCCCAATCGAGCTGGTTGAACCGGAAATCCTCCGGTTCAAGGCATTCGAGCCGATCCTTTTGTTGGGAAAATCCCGGTTCGCAGGCGTTGACATGAGGATCCGTGTGAAGGGTGGAGGTCACACTTCACAGATCTACGCCATAAGGCAAAGCATTGCAAAGGCACTCGTTGCGTTTTACCAGAAGTACGTTGATGAACAGAGCAAGAAGGAGATCAAGGACATTCTTGTTAGGTACGATCGTACTTTGCTTGTAGCTGATCCAAGGCGCTGTGAGCCTAAGAAGTTTGGTGGTCGTGGTGCTCGCGCTAGGTTCCAGAACATTTGTGGAGGTGGCACAGTTACTAATGCTCCAGTCCAAAGCAAATGCCACTTCCTCAATAAATTAGAATTGAAGTTGCCTTTTGCTTCTGCAACACCACTGAAACTATCAATGGAACAAGAATCAGCTTCTCCTAGATACCTTCAGTTTTGA 582 0.5 MATAPALEQVQCFGRKKTAVAVTYCKRGRGLIKINGSPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQNICGGGTVTNAPVQSKCHFLNKLELKLPFASATPLKLSMEQESASPRYLQF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0745 193 Pfam Ribosomal protein S9/S16 14 142 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lal16g0745 193 PANTHER RIBOSOMAL PROTEIN S9 4 143 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lal16g0745 193 PANTHER - 4 143 - -
Lal16g0745 193 Gene3D - 3 144 IPR014721 -
Lal16g0745 193 SUPERFAMILY Ribosomal protein S5 domain 2-like 9 142 IPR020568 -
Lal16g0745 193 ProSitePatterns Ribosomal protein S9 signature. 74 92 IPR020574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0745 Lal-Chr16 4823202 4825991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0745 1 142 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.028 6.84e-91 260