Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0741 ATGCAGAAGCTTAACTTTCCAGTTTCCTTATTTACTGTGCTTCTTCTCTTGTATTATATCTCCAACATGCTTCCTTCCTTCTTTGGATTGTTGACGTTTATTGGAATGCAGCTCCCTGTAATATTGGCTGATTGCCCTTTGGATTTTACTTTTTCAAACTTTACATTGGCGTCCTCTATATGCTCTCTCCGGGGAGACAGGGGAAAATGTTGTCGCTACATTAATGCTAACATTGCAATTTCTGTTGCTCGTTTTACTAATGCGACAAGTGACCTAGGGGTTCCTCTAGATGCTGTTGACATTTGTCTTCAAACCCTATCTCGTACTTTGCACCTTTATGGGGTTTCACAGAATGCAACAGTTTTCTGTGGTCTTGGGACAAAAATTCCCGTTAATTATGAATGCATGGGTCGAACTACTGTTATGCAAATGCTGCAATCTCCCAGATTTGGAGAGGTCACTAGAAATTGCAATGCGCCGCTTGGAGAGGAAATCAAATGCAAGAAGTGCTTAAATTCTGGCATTGGTTATCTGCATCATCTAGGAATTGATGATAATATAACATTGAACACATGCCGTGATGCCTCTTTTGTTTCACTAGCAAGCCAAGTTGATGAGATATCTACCGTTGACATCGCTAGCTGTTTCTTTGGGGTTCAAGGACTTCTTGGTGCTCCAGCAATTTTGCTAGCTTCAGAGTCATCCCCATCCTTGCCTACTCCTGAAGCTTCTCCAAGTCCAGCGTTTGCTGATAGCCCGAGTCAATTATTGTTAGGTTTACCTTTTAAGGAAAAGCACCATTCATATCACTTGACATTAGTTCCAGGTATTGCTATAGCTGTCACAGCTATTGCTATTATGATGCTTCTAGTCTTGATAGTTCTAATTCGCCAGAAAAGCAGAGATCTAGACGAGCCTGACAATAATTTTGGTAAAACCTCATCAAAAAAAGCCTTATCTCCTAGTGGAACTTGGAAATTTCAGGAAGGTTCTTCATCCATGTTCCGAAAATTTAGCTACAAGGAGATAAAGAAAGCAACAGAGGATTTTAGCACCATCATTGGGCAAGGGGGATTTGGGACAGTGTATAAAGCTCATTTTAGTGATGGCCTGGTGGCAGCGGTAAAGCAGATGAATAGCGTGTCAGAGCAAGTGGACGAAGAGTTCTGCAGAGAAATTGAGCTTCTTGCTCGGCTTCACCATCGACATCTTGTTTCTTTAAGAGGCTTTTGCATTAAAAAGCATGAGAGGTATTTGTTTCAGTGTGCTTACTTGTGTTCTTTGACACCATACACAAGCAAACCAAACCCCAGCTTGCCTGATGACAGGTTTCTGATGTATGAGTACATGGGAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGTAAAACACCTCTAACTTGGCGAATAAGAATACAAATTGCCATTGACGTGGCTAATGCACTGGAGTATCTTCATTTCTATTGTGATCCTCCTCTGTGCCATAGAGACATCAAGTCTAGCAACACTTTACTGGATGAGACCTTTGTTGCTAAGATAGCTGATTTTGGTCTAGCACAAGCTTCAAAACATAGTTCGATATGCTTTGAACCTGTAAACACTGAAATCCGAGGAACTCCAGGAATGAAATTCTTTTCTTCTTCACTATGTTTCAGTTAG 1662 0.411 MQKLNFPVSLFTVLLLLYYISNMLPSFFGLLTFIGMQLPVILADCPLDFTFSNFTLASSICSLRGDRGKCCRYINANIAISVARFTNATSDLGVPLDAVDICLQTLSRTLHLYGVSQNATVFCGLGTKIPVNYECMGRTTVMQMLQSPRFGEVTRNCNAPLGEEIKCKKCLNSGIGYLHHLGIDDNITLNTCRDASFVSLASQVDEISTVDIASCFFGVQGLLGAPAILLASESSPSLPTPEASPSPAFADSPSQLLLGLPFKEKHHSYHLTLVPGIAIAVTAIAIMMLLVLIVLIRQKSRDLDEPDNNFGKTSSKKALSPSGTWKFQEGSSSMFRKFSYKEIKKATEDFSTIIGQGGFGTVYKAHFSDGLVAAVKQMNSVSEQVDEEFCREIELLARLHHRHLVSLRGFCIKKHERYLFQCAYLCSLTPYTSKPNPSLPDDRFLMYEYMGNGSLKDHLHSPGKTPLTWRIRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNTLLDETFVAKIADFGLAQASKHSSICFEPVNTEIRGTPGMKFFSSSLCFS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0741 553 ProSiteProfiles Protein kinase domain profile. 348 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0741 553 SMART serkin_6 348 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0741 553 SUPERFAMILY Protein kinase-like (PK-like) 328 542 IPR011009 -
Lal16g0741 553 PANTHER BNAC06G02630D PROTEIN 442 543 - -
Lal16g0741 553 PANTHER BNAC06G02630D PROTEIN 28 420 - -
Lal16g0741 553 PANTHER OS01G0750732 PROTEIN 28 420 - -
Lal16g0741 553 PANTHER OS01G0750732 PROTEIN 442 543 - -
Lal16g0741 553 Pfam Protein kinase domain 352 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0741 553 Gene3D Transferase(Phosphotransferase) domain 1 450 544 - -
Lal16g0741 553 Gene3D Phosphorylase Kinase; domain 1 312 421 - -
Lal16g0741 553 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Lal16g0741 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Lal16g0741 553 Pfam SPARK 44 179 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0741 Lal-Chr16 4797222 4804679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0741 43 542 Receptor kinase-like Gene Family AT3G19300 58.929 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lal16g0741 Pkinase 1.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0741 - - ahf:112715638 768.074