Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0709 ATGAGTCTTTTCACTAGTGTATTTCATCATCTCATGGCTCTGAAACATTTCATTTCTCTTCTTACTCCTCTAAAATTCAACTCACAAACGGACCCTAAGAAACTATTTGTGGTTTTGTATGCTAGTCCATCTTTATGGCAGAACTGGATAAACAGTAATACTACTGACATGGGAAAGAAGGGGTGTTGCTTTGCTGCAATAAATAGTGTTTTCACACATCACTCCAAGAAAAAGGTAGTTAATGATTCAGATAATAAAAGTACAAAAGAGCAGAAGAAAGGAAAACTAAGGCATGGAGAGACCAAATCATTCATCCCCCTCTTCAGAGAGCCAAGTAGCATTGAGAAAATCTTTGGGGAGTTTGAAAGAGAGCAACAGATAGTTACTGTCAGGCCTCCTACACCTCCGGAGCAACCTAAAACACCGCCTTTTGTCCCTCCTAGAGATGCTTCTCCACGACCTTCGTCTCCAAGACCTCCATCTCCAAGGGGTGCTTCTCCCAGGGCTCCATCTCCACAACCGATCTCTCCTAAAGCAGCATCATCCGGTATTGTTCATCTCCCCGAGGAGGTTGGCTACAGAGCAGAGGCAACTCTAATGAACCAGCATGCCTCTGCAACTAAGATACAGGCTGCTTTAAGAGGTTATATGGCCAGGAGGGGTTTTAGAGCTATAAAGGGTTTGGTGAGACTTCAAGTAGTAGTTAGAGGACAGAATGTGAAGAGGCAGACAGTTAATGCCATGAAACACATGCAGCTTTTGGTGCGAGTTCAGTCTCAGATTCAATCACGAAGGTTCCAGCTGCTAGGGAACCAGGCACGATATCAAGCCGAGTTCAAGAATGACAACGCAAGTACCTTGGGCAAATTGTCTGAGGCACATGGAGACTGGGATGATAGCTTACTGACAAAAGAGGAAATAGAGGCAAGGTTACAGAGGAAAGTGGAAGCAATCCTCAAAAGAGAAAGAGAAATGGCATTTGCATATTCACATCAGTTGTGGAAAGGCACTCCAAAATCAAATCAAACAGGGATGACAGACATGCGATCCAGCGGATTTCCATGGTGGTGGAAATGGTTGGAAAGACAACTGCCAGAAGCATCAAATTCACAAGAAAGACAAGTCTTGAAGAATTTCCAACTTACACCTCCTAGACCATACTCAGAACAGAAAACTAGTCCAAGACCAACCTCAAGCACTTCTATGCAGCACCATTTTGCCAATGATAATATAGAAACTCCTACCCCAAAATCCACTAAATCAAGTATAGTGAAATATTCAAAGCCAACAAGAACTCCTCCATACAGAACTCCACAAGGCAACAGCTCAAAATATTCAAGGCCAAGAGCTATAGGAGCACATTCACCTTTTGATGTATCAATGAAAGATGATGAAAGTCTCACTAGCTGCCCTCCATTTTCAGTGCCAAACTACATGGCTCCAACAGCTTCTACTAAGGCAAAAGTGCGAGCTAGTAGTAATCCAAGAGAAAGGTTTGGTGGGACTCCAACAAGTGAATCATCACAGAGAAGATCTTCTTTTCCTTTGTCACAAGGCAGTGGATCACTCTTGTCAAACAAGGATTCTAGCTCTAAGAGGATACCAGATAAATATGAGTCACTTGAATCTTTAGGAAACATGAGTGTGAATTCAGTAGTGGCGAGAAAGCCTTTTACAAGATTTGTGTGA 1689 0.4275 MSLFTSVFHHLMALKHFISLLTPLKFNSQTDPKKLFVVLYASPSLWQNWINSNTTDMGKKGCCFAAINSVFTHHSKKKVVNDSDNKSTKEQKKGKLRHGETKSFIPLFREPSSIEKIFGEFEREQQIVTVRPPTPPEQPKTPPFVPPRDASPRPSSPRPPSPRGASPRAPSPQPISPKAASSGIVHLPEEVGYRAEATLMNQHASATKIQAALRGYMARRGFRAIKGLVRLQVVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRFQLLGNQARYQAEFKNDNASTLGKLSEAHGDWDDSLLTKEEIEARLQRKVEAILKREREMAFAYSHQLWKGTPKSNQTGMTDMRSSGFPWWWKWLERQLPEASNSQERQVLKNFQLTPPRPYSEQKTSPRPTSSTSMQHHFANDNIETPTPKSTKSSIVKYSKPTRTPPYRTPQGNSSKYSRPRAIGAHSPFDVSMKDDESLTSCPPFSVPNYMAPTASTKAKVRASSNPRERFGGTPTSESSQRRSSFPLSQGSGSLLSNKDSSSKRIPDKYESLESLGNMSVNSVVARKPFTRFV 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0709 562 MobiDBLite consensus disorder prediction 378 448 - -
Lal16g0709 562 MobiDBLite consensus disorder prediction 378 534 - -
Lal16g0709 562 Pfam Protein of unknown function (DUF4005) 428 524 IPR025064 -
Lal16g0709 562 SMART iq_5 201 223 IPR000048 GO:0005515
Lal16g0709 562 MobiDBLite consensus disorder prediction 132 174 - -
Lal16g0709 562 PANTHER IQ-DOMAIN 5-RELATED 57 559 - -
Lal16g0709 562 MobiDBLite consensus disorder prediction 78 102 - -
Lal16g0709 562 MobiDBLite consensus disorder prediction 128 180 - -
Lal16g0709 562 MobiDBLite consensus disorder prediction 470 490 - -
Lal16g0709 562 Pfam IQ calmodulin-binding motif 203 223 IPR000048 GO:0005515
Lal16g0709 562 PANTHER IQ-DOMAIN 13 57 559 - -
Lal16g0709 562 MobiDBLite consensus disorder prediction 497 529 - -
Lal16g0709 562 Coils Coil 304 324 - -
Lal16g0709 562 ProSiteProfiles IQ motif profile. 202 230 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0709 Lal-Chr16 4569883 4575051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0709 57 562 IQD Protein Family AT3G59690 47.122 1.18e-136 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0709 - - lang:109331805 798.119