Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0705 ATGGAAGGAGGAGGAGCTGCTCCGCCTGCTGACACCGTCATGTCGGACGCAGCGCCGCCGCCACCACCGCATCCCGACCGTCAAAAACATCAGCAACAACATCAGCAGCAGCATCTGGTTCCGGGGATGGGAGTGGAGAATATTCCGGCGACGGTTAGCCACGGCGGAAGGTTTATCCAGTATAATATATTTGGTAATATATTTGAAGTCACTGCCAAATACAAACCCCCTATCATGCCAATCGGAAAAGGAGCTTATGGTATCGTTTGCTCTGCTCTGAATTATGAGACGAATGAAAATGTTGCTATCAAGAAGATTGCTAATGCATTTGAGAACAAGATTGATGCGAAGAGGACCCTTCGTGAAATCAAGCTGCTTCGCCATATGGATCATGAAAATGTTGTCTCAATCAGGGATATAGTTCCACCGCCTCAAAGGGAGATGTTTAATGATGTTTACATTGCGTATGAGCTAATGGACACCGACCTTCATCAGATCATTCGTTCAAATCAAGCACTGTCGGAGGAGCATTGCCAGAGTTTACTAAATCTTATGCTTGACACCAGTGACATCCTTTTGTTTTTGGTGCAGTATTTTCTGTATCAAGTCCTTCGTGGGTTGAAGTACATACATTCTGCAAATGTTTTGCATAGGGACTTAAAACCTAGCAACCTTCTTCTGAATGCAAACTGTGACTTGAAAATTTGTGACTTTGGACTGGCTCGTGTCACCTCTGAAACTGATTTTATGACTGAATATGTGGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTAAACTCTTCTGATTACACAGCAGCAATTGATGTTTGGTCTGTTGGTTGTATTTTCATGGAGCTGATGGATCGAAAGCCATTGTTTCCTGGCAAAGATCATGTGCATCAGCTGCGTCTACTTATGGAGCTGATTGGCTCTCCGACGGAAGCAGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATCAGGCAACTACCTATATATCATCGCCAATCTTTCCAAAAAAAGTTTCCGCAAGTCCATCCGGCAGCAATAGATCTTGTTGAAAAAATGTTGACTTTTGATCCTAGAAAAAGGATTACTGTTGAAGATGCACTGGCACACCCTTACCTAACATCTCTACATGACATTAGTGATGAACCTGTGTGCATGAGTCCCTTCAGCTTTGACTTTGAGCAATATGCATTGACTGAGGAACAAATGAAGGAACTTATATACAGAGAAGCCCTAGCATTCAACCTTGAGTATCAGTAG 1275 0.4329 MEGGGAAPPADTVMSDAAPPPPPHPDRQKHQQQHQQQHLVPGMGVENIPATVSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNYETNENVAIKKIANAFENKIDAKRTLREIKLLRHMDHENVVSIRDIVPPPQREMFNDVYIAYELMDTDLHQIIRSNQALSEEHCQSLLNLMLDTSDILLFLVQYFLYQVLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGKDHVHQLRLLMELIGSPTEADLGFLNENAKRYIRQLPIYHRQSFQKKFPQVHPAAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHDISDEPVCMSPFSFDFEQYALTEEQMKELIYREALAFNLEYQ 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0705 424 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 37 423 - -
Lal16g0705 424 CDD STKc_TEY_MAPK 68 420 - -
Lal16g0705 424 ProSitePatterns Protein kinases ATP-binding region signature. 81 105 IPR017441 GO:0005524
Lal16g0705 424 SUPERFAMILY Protein kinase-like (PK-like) 80 386 IPR011009 -
Lal16g0705 424 Gene3D Transferase(Phosphotransferase) domain 1 159 405 - -
Lal16g0705 424 Pfam Protein kinase domain 80 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0705 424 MobiDBLite consensus disorder prediction 1 38 - -
Lal16g0705 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lal16g0705 424 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 37 423 - -
Lal16g0705 424 Gene3D Phosphorylase Kinase; domain 1 58 415 - -
Lal16g0705 424 ProSiteProfiles Protein kinase domain profile. 75 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0705 424 SMART serkin_6 75 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0705 Lal-Chr16 4533255 4536874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0705 1 424 MAP Kinase Gene Family AT2G43790 78.372 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal16g0705 Pkinase 1.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0705 K14512 - gmx:100805830 723.005