Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0695 ATGAATTTTCATTATTCAATTAGTCCTCAAGCACTTTTCTCCTTTTATTTACTAATCCACTTTGTTCTCATTAATGGCTACCATGCTAAGACCACAAGTGCTGACAGCAAAGTTATATCAATTGGTGCAATCATAGATATTAACTCTCGTATTGGAAAAGAACAGCAAGTAGCAATGGACATTGCAGCTCAAAGTTACAATAACACTTCAAACTCTTACAAATTAGCTCTCCATTTTCAGGACCTATCCAATGATCATTTCAAAGCTACTGCTCTTGTTGAAAATATGATTAAAAAGCAGAAGGTACAAGTAATTGTTGGAATGCATAAATGGACAGAAGCAACTCAAATGGCTGAACTAGGAAGCCAAGCTCAAGTTCCTATCATATCATTTGCAGCACCTTCCATTACCCCACAAATGATGCCGATTCGTTGGCCCTATTTGGTGACACTAGCTAACAATGGTACTGCATATGTAAAATGTATTGCAGATATAGTGCGTGCTTACGGGTGGCAGCGAGTAGTAGCCATTTACGAAGATGATGGTTATGGTGGAGATTATGGAATTCTAGCACTGCTATCTGAGGCCCTCCAATTTGATGGTTCAATTATCGAGTACCGATTAGCTCTCCCATCATCTTCTTATATGTCTGATCCTCGAGACTTTATTCGTGAAGAGCTGCGAAAGTTAATTGAAAGTACACAATCTCGGGTGTTCATTGTTATACAATCATCATTAGATATGGTGATTCATTTGTTCAGAGAAGCTTCACAAATGGGACTTGTGGATAAAGAATCAGCTTGGATAATCCCAGAAAGCATAACCAATTCGCTAGAGTATGTCAATAAAGTTGACATTTCCTATATGGAGGGAGCTTTAGGAATCAAGACATACTACTCTGAAAATAACAGTGAGTATCAATATTTTGAGGCTCAATTCCGAAGAACTTTCCGGGAGAAGTATCCTGAGGAAGATAACCGAAACCCAGGGTTTTATGCACTACAAGCATATGATAGCATTAAAATTATAGGACAAGCACTAAATAGAATGGCTAGTGGGGATAGTAGTGGCAAAAATACTTTATTAAGTGAAATATTGTCTACCAATTACCTTGGTTTAAGTGGAGAAATTCAATTTGAAGGAATGCAGCTATTACAGAATCCTACCTTAAGGATTGTAAATGTAGATGGGAAGAGTTACAGAGAATTAGACTTTTGGACTCTGGAACAAGGCTTCACCATTAATCTCTCTACAGAACAAGGTAGCAACAATGCTTATAGGAACACTAAAAGTTTAAGTGGTGTAATAATTTGGCCAGGGAAATTGGTTCAGAGAGTTCCAAAGGGATGGAATTTGCCTACTAAACAAAATCCAATGAAAATAGCAGTCCCTGGAAGAACCTCTTTTTCCAAGTTTGTAAAGGTTCATTATGGAGGGCATGGAAGTCCAATTAAATATACTGGATTCTGCATTGAGATTTTTGAAAAGGTGTTACAACTTCTGGAGTATGATCTGCCATATGTGTACTATCCCATCAAGGGAACCTATCCTGACCTGGTTCAACTTGTCTACAACAAGACTTTTGAGGCTGTAGTTGGTGATATAACGCTACTAGCGGAAAGATTGCAATATGTAGATTTTACAGTGCCATATGCAGAATCAGGATTATCAATGATAACTACCCAAAAGTATGAAAATTCAGCATTGATGTTTCTGAAGCCCTTCTCCGGGAAGATGTGGGCGGTAACTGGTGGCATATTCATTTACACAGTGATTGTAGTGTGGTACCTGGAGCGGGAAAGTAAAGAGTTTGATGGCAATTGGAAAAGCCAATTGGGGACTGCACTTTCGTTTACATTCTTCTCTCTATTCTTTGTACATAGTGAGTATTAA 1893 0.3809 MNFHYSISPQALFSFYLLIHFVLINGYHAKTTSADSKVISIGAIIDINSRIGKEQQVAMDIAAQSYNNTSNSYKLALHFQDLSNDHFKATALVENMIKKQKVQVIVGMHKWTEATQMAELGSQAQVPIISFAAPSITPQMMPIRWPYLVTLANNGTAYVKCIADIVRAYGWQRVVAIYEDDGYGGDYGILALLSEALQFDGSIIEYRLALPSSSYMSDPRDFIREELRKLIESTQSRVFIVIQSSLDMVIHLFREASQMGLVDKESAWIIPESITNSLEYVNKVDISYMEGALGIKTYYSENNSEYQYFEAQFRRTFREKYPEEDNRNPGFYALQAYDSIKIIGQALNRMASGDSSGKNTLLSEILSTNYLGLSGEIQFEGMQLLQNPTLRIVNVDGKSYRELDFWTLEQGFTINLSTEQGSNNAYRNTKSLSGVIIWPGKLVQRVPKGWNLPTKQNPMKIAVPGRTSFSKFVKVHYGGHGSPIKYTGFCIEIFEKVLQLLEYDLPYVYYPIKGTYPDLVQLVYNKTFEAVVGDITLLAERLQYVDFTVPYAESGLSMITTQKYENSALMFLKPFSGKMWAVTGGIFIYTVIVVWYLERESKEFDGNWKSQLGTALSFTFFSLFFVHSEY 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0695 630 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 20 629 - -
Lal16g0695 630 SMART GluR_14 460 622 IPR001320 GO:0015276|GO:0016020
Lal16g0695 630 Pfam Receptor family ligand binding region 56 397 IPR001828 -
Lal16g0695 630 Gene3D - 453 579 - -
Lal16g0695 630 PANTHER GLUTAMATE RECEPTOR 3.4 20 629 - -
Lal16g0695 630 SUPERFAMILY Periplasmic binding protein-like II 446 605 - -
Lal16g0695 630 SUPERFAMILY Periplasmic binding protein-like I 36 450 IPR028082 -
Lal16g0695 630 CDD PBP1_GABAb_receptor_plant 40 416 IPR044440 -
Lal16g0695 630 Pfam Bacterial extracellular solute-binding proteins, family 3 485 585 IPR001638 -
Lal16g0695 630 Gene3D - 33 157 - -
Lal16g0695 630 Gene3D - 158 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0695 Lal-Chr16 4478790 4484742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0695 13 629 Ion Channels AT2G29100 32.203 1.36e-87 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0695 - - lang:109349571 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0695 16 4478790 4484742 Lal16g0695 16 4478790 4484742 ECH