Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0693 ATGAATTTTCATTATTCAACTATTCCACAAGCACTTTTCTCCTTTTGTTTACTCATCCCCTTTGCTCTCATTAATGGCTACCAAGCTAAGGCCACAAATGCTGACAGCAAAGTTATATCAATTGGTGCAATCATAGATATTAACTCTCGTATTGGAAAAGAACAGCAAGTAGCAATGGACATTGCAGCTCAAAGTTACAATAACACTTCAAACTCTTACAAATTAGCTCTCCATTTTCAGGACCTATCCAATGATCATTTCAAAGCTACTGCTCTTGCTGAAAATATGATCAAAAAGCAGAAGGTACAAGTAATTGTTGGTATGCATAAATGGATAGAAGCAACTCAAATGGCTGAACTAGGAAGCCAAGCTCAAGTTCCTATCATATCATTTGCAGCACCTTCCATTACCCCACAAATGATGCCGATTCGTTGGCCCTATTTGGTGACACTAGCTAACAATGGTACTGCATATGTAAAATGTATTGCAGATATAGTGCGTGCTTACGGGTGGCAGCGAGTAGTAGCCATTTACGAAGATGATGGTTATGGTGGAGATTATGGAATTCTGGCACTGCTATCTGAGGCCCTCCAAGTTGATGGTTCAATTATCGAGTACCGATTAGCTCTCCCATCATCTTCTTATATGTCTAATCCTGGAGAGTTTATTCGTGAAGAGCTGCTGAAGTTAATTGAAAGTACACAATCTCGAGTGTTCATTGTTATGCAATCATCATTAGATATGGTGAGTTATTTGTTCAGAGAAGCTTCACAAATGGGACTAGTGGATAAAGAATCAGTTTGGATAATCCCAGAGAGAATAACCAATTCCCTAGAGTATGTCAATAAAGTTGACATTTCCTATATGGAGGGAGCGTTAGGAATCAAGACATACTACTCTGAAAATAACAGTGAGTATCAATATTTTGAGGCTCAATTCCGAAGAATTTTCCGGGAGAAGTATCCTGAGGAAGATAACCGAAACCCAGGGTTTTATGCACTACAAGCATATGATAGCATTAAGATTATAGGACAAGCACTAAATAGAATGGCTAGTGGGGATAGTAGTGGCAAAAATACTTTATTAAGTGAAATATTGTCTACCAATTACCTTGGTTTAAGTGGAGAAATTCAATTTGAAGGAATGCAGCTATTACAGAATCCTACCTTAAGGATTGTAAATGTAGATGGGAAGAGTTACAGAGAATTAGACTTTTGGACTCTGGAACAAGGCTTCACCACTAATCTCTCTACAGAACAAGGTAGCAACAATGCTTATAGGAACACTAAAAGTTTAAGTGGTGTAATAATTTGGCCAGGGAAATTGGTTCAGAGAGTTCCAAAGGGATGGAATCTGCCTACTAAACAAAATCCAATGAAAATAGCAGTCCCTGGAAAAACCTCTTTTTCCAAGTTTGTAAAGGTTGATTATGGAGAGGATGGAAATCCAATTAAATATAGTGGATTCTGCATTGAGATTTTTGAAAAGGTGTTAAAACTTCTAGAGTATGATCTGCCATTTGAGTACTATCCCATCAACGGATCCTATCCTGACCTGGTTCAACTTGTCTACAACAAGACTTTTGAGGCTGTAGTTGGTGATATAACACTACTAGCAGAAAGATTGCAGTATGTAGATTTTACAGTGCCATATGCAGAATCAGGATTATCAATGATAGTGCCGCAAAAGTCGGAAGATTCAGCATTGATGTTTCTGAAGCCCTTCACTTGGCAGATGTGGGTGGTAACTGGTGCCATATTTACTTACACAATGTTGGTAGTGTGGTCCCTGGAGCGGAAACAAAATCCAGAGTTTGATGGCAATTGGAAAAGCCAGATGGGGACTGCACTTTGGTTTACATTCTCCTCTCTATTCTTTGCACATAGGGAGAAAATGTATAGCAGCTTAACTCGTGTGGTGATGGGAGCATGGCTCTTTCTAGTTTTGATTCTTAACTCAAGCTACACTGCCAGTCTTTCTTCAATGCTCACAGTTCAACAATTAAAGCCAAATGCAACAGACATTGAGTGGTTGAAGAAGAACAATGCGAAAATTGGTTGTGATGGAGATTCATTTGTTAGGACATACCTAGAGAATGTAGAAGGGTTCAAGCCAGAGAGCATCGTACACATGAGTAATGACTACAATTATTCCACTGCATTCAAAAACCACTTAATAACTGCTGCTTTTCTCGAATTACCTTATGAAAAAGTATATGTCAGTAAATACTGCAAGGGATACTCTGGCTCTGTACCAACAACCAGATTTGGAGGACTGGGATTTATGTTCCAGAAAGGCTCCCCAGTTGCCAAAGACGTTTCTAAAGCTATATTGCAGCTCTTAGAACAAGGAGAAATTCAGAAATTGGAAGATAAATGGTTGAGTCCCTCAGGCGAGTGTACCAGCACCGTGATTTCCACCGATGTAGAAACTTTGAAGCTTGGAAATTTATGGGTTCTATATGTAATTTCTGGAGGCACTTCTACAATCTGTTTTATACTTTCTATCATCTATTCGCTAAAATATAGTCAAACACCTCAAAATAATGAACAAGGTAATGACACCCCTAATCCTTGGAAAAGGGCTGTCAAATTGGCTAAGAAAATATGTAGCAGAAAGCATGGCGAAGCAAAGGCACAGGAAGTTGTTACTGACTGTTCTTCCAGGTGGGATTCTATGAGCAACACTAATACCCCGGAGCATCAGCAGACAACGGATTCTCAGTTACTAGAAGTCATAATCCACTCTTCCCCATCACCAAATCAAATAACTCCTGGTCATAGTTAA 2787 0.3907 MNFHYSTIPQALFSFCLLIPFALINGYQAKATNADSKVISIGAIIDINSRIGKEQQVAMDIAAQSYNNTSNSYKLALHFQDLSNDHFKATALAENMIKKQKVQVIVGMHKWIEATQMAELGSQAQVPIISFAAPSITPQMMPIRWPYLVTLANNGTAYVKCIADIVRAYGWQRVVAIYEDDGYGGDYGILALLSEALQVDGSIIEYRLALPSSSYMSNPGEFIREELLKLIESTQSRVFIVMQSSLDMVSYLFREASQMGLVDKESVWIIPERITNSLEYVNKVDISYMEGALGIKTYYSENNSEYQYFEAQFRRIFREKYPEEDNRNPGFYALQAYDSIKIIGQALNRMASGDSSGKNTLLSEILSTNYLGLSGEIQFEGMQLLQNPTLRIVNVDGKSYRELDFWTLEQGFTTNLSTEQGSNNAYRNTKSLSGVIIWPGKLVQRVPKGWNLPTKQNPMKIAVPGKTSFSKFVKVDYGEDGNPIKYSGFCIEIFEKVLKLLEYDLPFEYYPINGSYPDLVQLVYNKTFEAVVGDITLLAERLQYVDFTVPYAESGLSMIVPQKSEDSALMFLKPFTWQMWVVTGAIFTYTMLVVWSLERKQNPEFDGNWKSQMGTALWFTFSSLFFAHREKMYSSLTRVVMGAWLFLVLILNSSYTASLSSMLTVQQLKPNATDIEWLKKNNAKIGCDGDSFVRTYLENVEGFKPESIVHMSNDYNYSTAFKNHLITAAFLELPYEKVYVSKYCKGYSGSVPTTRFGGLGFMFQKGSPVAKDVSKAILQLLEQGEIQKLEDKWLSPSGECTSTVISTDVETLKLGNLWVLYVISGGTSTICFILSIIYSLKYSQTPQNNEQGNDTPNPWKRAVKLAKKICSRKHGEAKAQEVVTDCSSRWDSMSNTNTPEHQQTTDSQLLEVIIHSSPSPNQITPGHS 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0693 928 Pfam Receptor family ligand binding region 56 397 IPR001828 -
Lal16g0693 928 Gene3D - 696 797 - -
Lal16g0693 928 Pfam Bacterial extracellular solute-binding proteins, family 3 485 795 IPR001638 -
Lal16g0693 928 Gene3D - 568 695 - -
Lal16g0693 928 PANTHER GLUTAMATE RECEPTOR 3.4 20 907 - -
Lal16g0693 928 PIRSF IGluLR_plant 8 922 IPR017103 -
Lal16g0693 928 CDD PBP1_GABAb_receptor_plant 40 416 IPR044440 -
Lal16g0693 928 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 20 907 - -
Lal16g0693 928 Gene3D - 158 327 - -
Lal16g0693 928 Pfam Ligand-gated ion channel 796 826 IPR001320 GO:0015276|GO:0016020
Lal16g0693 928 Gene3D - 33 157 - -
Lal16g0693 928 SUPERFAMILY Periplasmic binding protein-like II 445 795 - -
Lal16g0693 928 CDD GluR_Plant 457 794 - -
Lal16g0693 928 Gene3D - 461 567 - -
Lal16g0693 928 SUPERFAMILY Periplasmic binding protein-like I 36 450 IPR028082 -
Lal16g0693 928 SMART GluR_14 460 796 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0693 Lal-Chr16 4460955 4466303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0693 12 843 Ion Channels AT2G29120 32.028 1.82e-136 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0693 - - aprc:113859865 1259.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0693 16 4460955 4466303 Lal16g0693 16 4460955 4466303 ECH