Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0690 ATGGCTATTCGTGCAGCTTCCGAAGAGATTCTTGAGAATGTATGGTCTAAAATTGTCAGCAGTGATAATGCAAAAGAATCTCCAAACTCCTGGGAAGAACTACCTAATCAAGATGTGTCTATGGAGATTTTAAAAAGGCTTCCAAGTTTAGGAAGATGGATATCAATGGGAGCTGATTTCTGGGAAGAAATTTTGGATGGTACTATTCTACCTGATACAAGAAATACACAAGATTCTAGCAATACCAATTTGGAAATTGACACTGCTAATAAATCCAATAACCAAAAGATAGAAGAGCAAGAACCTGTTGTTAGAGAAAAACACTACAGAGGAGTAAGGAGAAGGCCATGGGGAAAATATGCAGCTGAGATTAGAGACTCATCAAGGAAAGGTGCAAGAGTTTGGCTTGGAACATTTGAAACAGCTGAAGAAGCAGCTTTGGCTTATGACAAAGCTGCTTTGAGAATTAGAGGTCAAAAGGCACACCTCAATTTCCCACTTGAGACAGTTGCAAAGGCTTTAGGACTTGACCAGAAAGGAATAACTGGTGTCACTGCATGTGTTTCTAAAACTTTTCAACAGGATTATAGCAAAGAAAACTATAGTAATGGCCAGAAGAGAGGATCAAGGAGAAGGAAAAGATTTATAGATATGGTGGATGAACAACCTGCTGCAAAAAAATTGGCAAGCTTAGAGGGTATACTAGAAAATGAACTTGATGATTTTGTGTTTCGTGACTTGGGGAGTGATTACTTGGAAAATTTGCTATCTTCTTTTTGA 780 0.3821 MAIRAASEEILENVWSKIVSSDNAKESPNSWEELPNQDVSMEILKRLPSLGRWISMGADFWEEILDGTILPDTRNTQDSSNTNLEIDTANKSNNQKIEEQEPVVREKHYRGVRRRPWGKYAAEIRDSSRKGARVWLGTFETAEEAALAYDKAALRIRGQKAHLNFPLETVAKALGLDQKGITGVTACVSKTFQQDYSKENYSNGQKRGSRRRKRFIDMVDEQPAAKKLASLEGILENELDDFVFRDLGSDYLENLLSSF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0690 259 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 9 259 - -
Lal16g0690 259 ProSiteProfiles AP2/ERF domain profile. 108 166 IPR001471 GO:0003700|GO:0006355
Lal16g0690 259 Pfam AP2 domain 108 158 IPR001471 GO:0003700|GO:0006355
Lal16g0690 259 PRINTS Ethylene responsive element binding protein signature 109 120 IPR001471 GO:0003700|GO:0006355
Lal16g0690 259 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Lal16g0690 259 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 9 259 - -
Lal16g0690 259 SUPERFAMILY DNA-binding domain 108 168 IPR016177 GO:0003677
Lal16g0690 259 Gene3D AP2/ERF domain 107 168 IPR036955 GO:0003700|GO:0006355
Lal16g0690 259 CDD AP2 107 166 IPR001471 GO:0003700|GO:0006355
Lal16g0690 259 SMART rav1_2 108 172 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0690 Lal-Chr16 4440336 4441115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0690 9 259 AP2-EREBP Transcription Factor Family AT4G18450 37.049 5.27e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lal16g0690 AP2 3.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0690 - - lang:109334345 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0690 16 4440336 4441115 Lal16g0690 16 4440336 4441115 ECH