Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0686 ATGGCTTTCAGTAGCAGTAATGGAAGTGAAGAGAGTGAGCTGTATCATGCACAAATCCACTTGTATAAGCATGTATATAACTTTGTAAGCTCCATGGCTCTCAAATCTGTTATGGAACTAGGCGTAGCAGATATAATCCATAACAATGGAAAACCCATCACTCTTTCTGAGTTAGCCTCATCCTTGAAACTCCACCCTTCAAAAATTGGTGTCCTTCATAGGTTTTTGCGCCTCCTAACACACAATGGATTCTTTGCCAAAACAAAAGTACAAGAAGAAGAAGCATATGTTTTGACCTCTCCATCAAAACTTCTTATAACAACAAAGCCAACATGTTTGGCACCTATAGTTAAGGGAGCCCTTCATTCAAGTTCCCTAGACATGTGGCACTCTTCCAAGAAATGGTTCACTGAGGATAAGGGACTCACACTTTATCAGACTGCAACTAATGAGAGTTTTTGGGACTTCCTTAATGGAAATCCTGATTCATTGATCATGTTTCAAGAGGCTATGGCAGCTGATTCTCATATGTTCAAGCTTGCTCTCAATGAGTGCAAACATGTGTTTGACAATTTGGAATCACTAGTTGATGTGGGAGGAGGGAATGGTGTTGTAACAAAGCTCATCAATGAAGCATTTCCTCACATGAAATGCATAGTATTTGATCAACAACAGGTTGTGGCTAATTGCTCAGGAAATGAAAATTTTAATTTTGTTGCTGGGGATATGTTCAAATCAATTCCTTCTGCTGATGCAATTTTACTCAAGTGGGTTCTACACGATTGGAATGATGAATTATCTTTGAAGATATTGAAGAACTGCAAAGAAGCTATTTCACACAAAGGGAAAGAAGGAAAAGTGATTATCATCGACATAGCTATAGATGAAGAAAATGATGATCCCGAATTGACAGAGTTGAAGTTGGATTATGACTTGGTGATGCTAACTATGTTCAATGGAAAAGAAAGGGGAAAGAAAGAATGGGAGAATCTTATCTATGAAGCAGGCTTTAGCAACTACAAGATCACCCCAATTTGTGGCTTCAAGTCTCTCATTGAAGTCTATCCTTAG 1071 0.3847 MAFSSSNGSEESELYHAQIHLYKHVYNFVSSMALKSVMELGVADIIHNNGKPITLSELASSLKLHPSKIGVLHRFLRLLTHNGFFAKTKVQEEEAYVLTSPSKLLITTKPTCLAPIVKGALHSSSLDMWHSSKKWFTEDKGLTLYQTATNESFWDFLNGNPDSLIMFQEAMAADSHMFKLALNECKHVFDNLESLVDVGGGNGVVTKLINEAFPHMKCIVFDQQQVVANCSGNENFNFVAGDMFKSIPSADAILLKWVLHDWNDELSLKILKNCKEAISHKGKEGKVIIIDIAIDEENDDPELTELKLDYDLVMLTMFNGKERGKKEWENLIYEAGFSNYKITPICGFKSLIEVYP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0686 356 PANTHER O-METHYLTRANSFERASE 6 356 IPR016461 GO:0008168
Lal16g0686 356 Gene3D - 3 105 IPR036388 -
Lal16g0686 356 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
Lal16g0686 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 356 IPR016461 GO:0008168
Lal16g0686 356 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Lal16g0686 356 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 6 356 - -
Lal16g0686 356 Gene3D Vaccinia Virus protein VP39 107 356 IPR029063 -
Lal16g0686 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 355 IPR029063 -
Lal16g0686 356 Pfam O-methyltransferase domain 129 338 IPR001077 GO:0008171
Lal16g0686 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0686 Lal-Chr16 4422688 4427592 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0686 10 355 Monolignol Biosynthesis Gene Families AT1G77520 30.978 1.01e-41 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0686 K22588 K13259 gmx:100807589 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0686 16 4422688 4427592 Lal16g0686 16 4422688 4427592 ECH