Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0685 ATGGAACAACAAACTCCTTCTCTGAAACTCGTTTTCCTCCAAGGCCCTCGACAAGGTGAAACCCTCCATTACCCACCCGGTTCCTCCATCCGAATCGGTCGTATCGCCCGCGGCAACAACCTTTCCATCAAAGACTTTGGCATCTCCTCCAAACACCTCTCTATCACTTCCGATTCTGGTAAATGGGTTCTCCTAGATCTCGATTCCTCAAACGGCACCGTTTTGAACTCCAACAAGGTAACCCCTCTTGTCCCTTTCCATCTTCACCACGACTCTACTATCAAGATCGGAGAACTCACTTCCATTCACGTTACCCTCGTTCCCCACCAACAAGGTACTCTTAATGATAGTAATAACGTGGTGAGGAACCCGACTCGTCCCGGGTTAACCGGGTCTGTTGAACCGGGTCTGAGGGGTGATGATTTTGTTGCACCACCGGTTGAGGTTGAGCCTGCGGCTAAACAACGGCGTGGAAGGTCTGCCAAAGGTACGGGTTTGAATGCGATTGGGGAAAACGAATCTGGGTTGGTGGGTCAGTCCGATAATAAACGGGTGACCCGGAATGCTAAACATAAGAGGCAGAGTGTGATTGAGATTCCTGATTCCAGTGGCTATGCTGATGTGGAAGTACCGAAGAAGATGACCAGGGCTACACGAAATTTGAAGAAAGAGGAGATTGTCATTGGGAATTCGGATGCTCCGAATGAGAAGGTGGAGGAACCAAAGAATATTCGGGTGACCCGGAATATGAAGAATAAAGGAATTGTGATTGGGGGAAATGCTCAAAATTCAAACTTGGAGGAGTGTGGGGTGGAAAAAGTTGAGGGAAAGAAAAAGAAGGGCCGTGGTTGTGCTAAGAAGAAGATTGTACAAGAAGAAAGCGTTAAAGTTGCTGAATTGGAAGAATCGAAGGTTGATGATGAGGTAGAGTTGAATCATCACTCTGAAGATGGGTTGAAAGAGAGAAGTGCTGATGAGAAAAAAGGTGAAGATTGTTGTGCACAAGAGGAGAATTTGGGTGGAAAATGCAATTGGCCTGGTTTGGAGAGGATGAGTCTTGGTGAGTGGTTTGATTTCTTGGAAGTTCAGTTACCCAAACAGGTAATTGGTTCAACTGAAGAGATTATTGACTCTATGAGACACAAAGCTGAGAGACTCCGCAATTACATCACAGAGCAAAACAATGACAAGGGTAAAATGCCTGTGTGA 1209 0.4632 MEQQTPSLKLVFLQGPRQGETLHYPPGSSIRIGRIARGNNLSIKDFGISSKHLSITSDSGKWVLLDLDSSNGTVLNSNKVTPLVPFHLHHDSTIKIGELTSIHVTLVPHQQGTLNDSNNVVRNPTRPGLTGSVEPGLRGDDFVAPPVEVEPAAKQRRGRSAKGTGLNAIGENESGLVGQSDNKRVTRNAKHKRQSVIEIPDSSGYADVEVPKKMTRATRNLKKEEIVIGNSDAPNEKVEEPKNIRVTRNMKNKGIVIGGNAQNSNLEECGVEKVEGKKKKGRGCAKKKIVQEESVKVAELEESKVDDEVELNHHSEDGLKERSADEKKGEDCCAQEENLGGKCNWPGLERMSLGEWFDFLEVQLPKQVIGSTEEIIDSMRHKAERLRNYITEQNNDKGKMPV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0685 402 MobiDBLite consensus disorder prediction 152 179 - -
Lal16g0685 402 PANTHER NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 5 351 - -
Lal16g0685 402 SMART FHA_2 29 80 IPR000253 GO:0005515
Lal16g0685 402 CDD FHA 7 98 IPR000253 GO:0005515
Lal16g0685 402 MobiDBLite consensus disorder prediction 307 328 - -
Lal16g0685 402 PANTHER F16B3.3 PROTEIN 5 351 - -
Lal16g0685 402 Gene3D - 1 110 - -
Lal16g0685 402 Coils Coil 376 396 - -
Lal16g0685 402 ProSiteProfiles Forkhead-associated (FHA) domain profile. 30 80 IPR000253 GO:0005515
Lal16g0685 402 Pfam FHA domain 31 97 IPR000253 GO:0005515
Lal16g0685 402 SUPERFAMILY SMAD/FHA domain 4 105 IPR008984 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0685 1 116 PP2C-type Phosphatase Gene Family AT5G19280 29.927 1.87e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0685 - - lang:109349373 671.774