Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0684 ATGGAGTCGCGAGTGTTGTCACGCGCTGGTGCTTTCTCTCCTCTTTCTCACTTCCGCAAGCTGCCGTCGCGTGAACCCACCGCCATCTTTTATAATTCTTCCACCGTCCCGGTCACCGTTAAGGCAACGGGATCAGTGGCCGACGGCGGGAACCTCGTGTGGGGGAGGCAGCTGCGTCCAGCACTGATCTCGCCGGCGCTGAAGAAGGTCCTCCTTCAGCCATGTCATGCCACCGCCGCCGAGGGTAATGATTCAGCCGGAGAGGCGAAGGTAGCTCCGGTAGGGTTCTTCAGCAAGTACCCGGCTCTGGTCACCGGATTTTTCTTCTTCACGTGGAACAACGGTCAACTGTCTCAGACACTGGTTTACTACTACGTACTACCACTCTCTACGTACTTCTTGAATGTGATTTTTAACATCCTCAATAAGAAGATCTACAACTATTTCCCCTATCCATACTTTGTGTCGGTTATCCATTTATTCGTGGGAGTGGTTTACTGTTTGATCAGCTGGACCGTGGGTCTTCCTAAGCGTGCTCCTATTGACTCCAACCTGTTGAAGTTGCTCATTCCTGTGGCTTTGTGTCACGCATTAGGCCATGTGACTAGTAATGTTTCATTTGCTGCAGTTGCTGTTTCTTTCACACATACCGTTAAAGCTCTTGAGCCATTCTTCAATGCTGCTGCTTCACAGTTCATACTTGGACAATCAATTCCCATCACTTTATGGCTCTCACTTGCTCCAGTTGTTATTGGTGTGTCCATGGCATCATTGACTGAGCTCTCATTCAACTGGCTAGGCTTCATAAGTGCTATGATTTCAAACATTTCTTTTACATACCGGAGTCTCTATTCCAAGAAGGCCATGACTGATATGGATAGTACCAATATTTATGCCTACATTTCCATCATTGCTCTAATTGTGTGCTTACCACCAGCAATAATTCTGGAAGGACCTACCCTGCTGAAGCATGGCTTCAATGATGCAATTACTAAAGTAGGTTTGACCAAGTTCGTCACAGATCTTTTCTGGGTTGGGATGTTTTACCATCTCTACAATCAGGTTGCCACTAATACACTGGAGAGAGTGGCACCTCTTACTCATGCAGTTGGCAACGTACTGAAACGTGTGTTTGTTATTGGATTTTCAATTGTAATATTTGGTAACAAGATTTCCACCCAAACTGGTATTGGAACAGCCATTGCAATTGCAGGAGTGGCATTGTACTCCCTCATCAAGGCCAAGCTGGAGGAAGAGAAGCGATGGTGTGATATGGTTATGGAAACTTCCAAAACCGCAATATTCAAGCGAAAGCAGCATAAAAAGAAAGGCGCCAAGCCAACTTGGAGCATGTCTTGCGTTGTAAATCAACACAAATTACCTTCAAAATAA 1392 0.4612 MESRVLSRAGAFSPLSHFRKLPSREPTAIFYNSSTVPVTVKATGSVADGGNLVWGRQLRPALISPALKKVLLQPCHATAAEGNDSAGEAKVAPVGFFSKYPALVTGFFFFTWNNGQLSQTLVYYYVLPLSTYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWTVGLPKRAPIDSNLLKLLIPVALCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSLYSKKAMTDMDSTNIYAYISIIALIVCLPPAIILEGPTLLKHGFNDAITKVGLTKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTAIAIAGVALYSLIKAKLEEEKRWCDMVMETSKTAIFKRKQHKKKGAKPTWSMSCVVNQHKLPSK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0684 463 Pfam Triose-phosphate Transporter family 131 410 IPR004853 -
Lal16g0684 463 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 131 420 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lal16g0684 463 PANTHER BNAC02G47130D PROTEIN 3 430 - -
Lal16g0684 463 SUPERFAMILY Multidrug resistance efflux transporter EmrE 165 259 - -
Lal16g0684 463 PANTHER SOLUTE CARRIER FAMILY 35 3 430 - -
Lal16g0684 463 SUPERFAMILY Multidrug resistance efflux transporter EmrE 304 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0684 Lal-Chr16 4413375 4417071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0684 1 421 Antiporters AT5G46110 73.843 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0684 K15283 - gmx:732611 671.389