Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0676 ATGATGCTGATGAGAGAGTTGATTACTAACTCCACTATAAGGGTGCGTTCTAACCTGCGAACTGCAGTAATCGATTACAATATAACAGTAATCGATTACACTATTGTTGTAATCGATTACACTATTGTTGTAATCGATTACCACATATTAGGGGACAAACCGACTTCCTATGAGAAGTCGGTTTGTGGTGGCTTTACTTCACTTGAGAAGTCGGTTTGGCAGTGTGTGACTTCTCTTGAGAAGTCGAGACTTTGGATGGAAGAAGAAATGAACTTGAATCATGAAATACCAGAGGCCGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAAGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAATGTATGCTATGAAGAAAGGATTTGGCATTAGAAAATATCATACCCGTCGGGACAAGGATGGTGAAATTTTATGGCAATCATTTTTTTGTGATAGAGAGGGATTTAGAGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGGTGATTGGTATGTTAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTACGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAGGCAAAATTTTTGGTTCATTCGCCGGTCAATCTGGTGGATATCGGTATATTGGTTTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAATAATAGGAAATGGTGACGCAGAATCAGCATTACAATACCTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACTGTATTTGCTGCTGGTATTGTGTCCAATGAGACAGAGGAAACGTATGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGAATTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATGCTTGGACATATCAGATATTTGATTGCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTCTTTGCTGGTTTGCATACGACATCACGTTGTGAGGGATTACATTCACAAATGGGGAGATATGTAGAATCTGGGTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGAGGAACAATGAGGTCATGGAAGATTTTAAATCTTCGTATGGTGATGAATTGTTACAAACTCCTTATCATAGTTTAGAGGGTCATGCTGCTTCCATATATACTAGAGTTGTTTTCAAAGAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACCTCAAGTCATGTCATATACAAGATTGGGAAGCATTATAATCCGAACAAGAAATGGCATGTATCACATTATGATAATGGTAGTAATGTGGACATCAAATGCTCGTGTAAACGAATGGAATCTTTTGGGATGCCATGCAGTCATAGTGTTTTTTTGTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTGGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAGGTGTTAATTTTCAACAATGCGAGTTAAGCAGAGAATCGGTTAGAAGCAGTAGATACGGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAAAGGAGGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAATGTGGTAGACTCCGATCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCAATGTAGATCAAGTAAGAGACCCAGTTCGAGTGCGTGCTAAAGGGAGAGTACCGGGGATTACCTCAAGGTCCAAGAGAGGTAATCAATGTGGTATATGTCGAGAAATTGGGCACAATAGGGCAAGTTGTCCAAATATTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCAATGAAGAATGA 2409 0.3711 MMLMRELITNSTIRVRSNLRTAVIDYNITVIDYTIVVIDYTIVVIDYHILGDKPTSYEKSVCGGFTSLEKSVWQCVTSLEKSRLWMEEEMNLNHEIPEAVDEIDVSEDENINEVEEFDFEEIDFGSLNEDEMYAMKKGFGIRKYHTRRDKDGEILWQSFFCDREGFRDKKNELVRKRAPRKETRCGCLARMKIHIDKEKGDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDIALMNTMREVGIGTGKIFGSFAGQSGGYRYIGFSKKDMYNQIQRQRIIGNGDAESALQYLKEQSKSDSAMYWRHSVDEEGKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVSNETEETYVWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRIFPATHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYADVEIDEFNMMWEELIAKHALHNNAWTYQIFDCRSMWARSYIRGKFFAGLHTTSRCEGLHSQMGRYVESGYNVTEFLHHFQRCLSYMRNNEVMEDFKSSYGDELLQTPYHSLEGHAASIYTRVVFKEFREILLEAAKLRIISSQQTSSHVIYKIGKHYNPNKKWHVSHYDNGSNVDIKCSCKRMESFGMPCSHSVFLLLILDISQLPSCLVLERWTKKAKNVEGVNFQQCELSRESVRSSRYGALSDACRVLCNLACEKEEDFSEMLEKVYNECGRLRSKQHSSSMENVDNANVDQVRDPVRVRAKGRVPGITSRSKRGNQCGICREIGHNRASCPNIVGSCSRTFDNDFNEE 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0676 802 Pfam MULE transposase domain 336 430 IPR018289 -
Lal16g0676 802 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 117 754 IPR031052 GO:0006355
Lal16g0676 802 ProSiteProfiles Zinc finger SWIM-type profile. 613 651 IPR007527 GO:0008270
Lal16g0676 802 Pfam FAR1 DNA-binding domain 132 216 IPR004330 -
Lal16g0676 802 PANTHER OS02G0262500 PROTEIN 117 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0676 Lal-Chr16 4379220 4382231 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal16g0676 MULE 1.6e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0676 - - lang:109350553 640.958