Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0640 ATGAAAATAATGAACCGACACAAAAATACTCTTGTTCTGTTGTTTTTCTTATCACTCTTTTGTTTTCATACTCTCTTCACACATGCATCTGATTCCATCACACAAAGTGAATTGATCAAAGATGGTGACACTCTTGTGTCAGATGGACGTAACTTCGAAATGGGTTTCTTCAGTTTCAATGATTCATCTTCAAGATACGTTGGAATATGGTACTACAATGTTTCTGTCCCAGCATATATATGGGTTGCAAATAGAGAAAAACCCATCAAAGGTAGAGAAGGTTTGTTAAGAATGAAAAATGATGGCAACTTGGTTGTTCTTGATGAAAATAAAAATGAAGTGTGGTCTACTAACATGTCAAATCCCATGAATAACTCACAAGCTGTTATTCAAGATGATGGAAACCTTGTTCTTTCAAACAAAGATGATGGGGTTTTATTATGGCAAAGTTTTGATAAACCAACTGATACATTTTTACCAGGTATGAAGATTCCAGTGAGTGATGAAATGAAGGAAACCAAAGTTTTTAGATCATGGAAATCAAAAACTGATCCTTCTTTTGGAAATTACACCATGGGGATTGATTCCAAGACATCATCACCACAAATAGTGATTTGGGAAGGAGAAGAAAGAATGTGGAGGAGTGGTTATTGGGATGGTAGATTATTCACAGGTGTTTACAATATGACAGGGTATTATCAATTTGGTTTTAAACTTAACGAGGATGAAAAAGGAGGAAGGTACTTTACATTTAGCAAATTGAACAAGAGTGATAAGGTAATGTTTCAGATAGGTTGGGATGGATATGAAAGAATGTTCAAGTGGGATGAAAATGAGAAACTTTGGAATGTGTTACAAAAGGAGCCTGTTAATAAGTGTGAGTATTATAATCACTGTGGCAGTTTTGGAGTATGTGATATGTCTAATTCACCTACATGTGGTTGCATGAAAGGGTTTGAACCAAGGGATAAGGATAATTGGAAGAGGGAGATTTGGTCTGGAGGGTGTAAGAGGAGAACTCCACTGAAGGCTGAGATAGTTAATGGTTCTGACAGTGTTGGAGAAGATGGTTTCTTAGTGCAAAGGTGTATGAAGTTTCCAGATTTTGCACAGTTAGTTAGTGATCCCGTTGTTTATGACAGTAAGGGTTGTGAGTCTATTTGTCTGCAGAATATTACTTGTACTGCATATGCATATGTTCTTGGAATGGGATGCATGGTTTGGTATGAGGAGTTAGTTGATGTTCAGAACCAGGAAAACCTTGGAAATAAAATGAACATTCGTCTTGCGCATTCCGAGTTAGATCACAGTGACAAGAAGACCAAAATTTGGATAATAACATCAACTGTTGTGGGGGGTCTAATATGCCTTGGAATCTTTGTATGGTTGATGTTAAGGTTCAAGAGAAAACTCAAAGTTTCCACAGCTTCTCGTAGCAAGAATAGCAATCTACAAGTCTCAGGAGGAATCAAGAGTAGAGAATTTTCAGCAGCATTTTCAGAATCAACTGAAGCCTATAGTTTGGAAGTGAATCAACTTAGTGGACCAGAACTACCAGTGTTCAATTTTAGTTACATTGCAATAGCCACAGATGATTTCTCAGAAGAAAATAAGCTTGGTCAAGGAGGATTTGGTCCTGTCTATAAGGGGAAGCTTCCAGGGGGTGAACAAATAGCTGTGAAGAAGCTTTCAAAGCGATCTAGCCAAGGTTCAGAAGAATTCAAGAATGAAATGATGCTAATAGCAAAACTACAACATAGAAATCTTGTTAGACTACTAGGATGTTCCATTCAAGGGGAAGAAAAGTTACTGGTATATGAATATATGCCAAACAAAAGCTTGGACTTCTTTTTATTTGATCCAGTAAAGCAAGCACTACTAGACTGGACAAAACGCTTTGAGATCATTGAAGGCATTGCACTAGGGCTACTTTATCTGCACCGAGATTCAAGACTAAGAATAATTCACCGAGATCTAAAAGCAAGCAACATTTTGCTAGACGAAAACATGAATCCAAAAATTTCGGACTTTGGCATGGCAAGGATATTTGGGGGAAACGAGGATGAAGCCAATACAAATAGAGTGGTTGGTACATATGGCTACATGGCCCCAGAATATGCAATGGAGGGTCTATTTTCAATCAAATCCGATGTCTATAGTTTTGGTGTGTTGTTGCTAGAGATTATAAGTGGCCGCAGGAACACTAGCTTTCGTCACACGGATGATTCAAGTCTCATAGGATATGCCTGGCATCTTTGGAGTGAACAGAGAGTATTTGAGCTTATTGATCCTTCTATTCGTGATTCAAGTCCTAAAGATAATGTTTTGAGGTGCATACACATAGGAATGTTATGTGTACAAGATTCAGCAGCTCGTAGACCAAACATGTCTTCTGTATTGTTGATGCTGGAAAGTGAAGCAACAACTCTTCCCTTGCCTAAGCAACCTTTGATGGTTACTTCCATGAGGAGATTTGATGATATAGAAGTTCATACAGAATGTCATGATGTTTCAAATGATTTGACAGTTACAATGGTAACAGGGAGATAG 2550 0.3776 MKIMNRHKNTLVLLFFLSLFCFHTLFTHASDSITQSELIKDGDTLVSDGRNFEMGFFSFNDSSSRYVGIWYYNVSVPAYIWVANREKPIKGREGLLRMKNDGNLVVLDENKNEVWSTNMSNPMNNSQAVIQDDGNLVLSNKDDGVLLWQSFDKPTDTFLPGMKIPVSDEMKETKVFRSWKSKTDPSFGNYTMGIDSKTSSPQIVIWEGEERMWRSGYWDGRLFTGVYNMTGYYQFGFKLNEDEKGGRYFTFSKLNKSDKVMFQIGWDGYERMFKWDENEKLWNVLQKEPVNKCEYYNHCGSFGVCDMSNSPTCGCMKGFEPRDKDNWKREIWSGGCKRRTPLKAEIVNGSDSVGEDGFLVQRCMKFPDFAQLVSDPVVYDSKGCESICLQNITCTAYAYVLGMGCMVWYEELVDVQNQENLGNKMNIRLAHSELDHSDKKTKIWIITSTVVGGLICLGIFVWLMLRFKRKLKVSTASRSKNSNLQVSGGIKSREFSAAFSESTEAYSLEVNQLSGPELPVFNFSYIAIATDDFSEENKLGQGGFGPVYKGKLPGGEQIAVKKLSKRSSQGSEEFKNEMMLIAKLQHRNLVRLLGCSIQGEEKLLVYEYMPNKSLDFFLFDPVKQALLDWTKRFEIIEGIALGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGMARIFGGNEDEANTNRVVGTYGYMAPEYAMEGLFSIKSDVYSFGVLLLEIISGRRNTSFRHTDDSSLIGYAWHLWSEQRVFELIDPSIRDSSPKDNVLRCIHIGMLCVQDSAARRPNMSSVLLMLESEATTLPLPKQPLMVTSMRRFDDIEVHTECHDVSNDLTVTMVTGR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0640 849 Gene3D - 24 151 IPR036426 -
Lal16g0640 849 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Lal16g0640 849 PIRSF SRK 2 849 IPR024171 GO:0004674
Lal16g0640 849 SMART serkin_6 533 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0640 849 Pfam D-mannose binding lectin 79 180 IPR001480 -
Lal16g0640 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Lal16g0640 849 SUPERFAMILY Protein kinase-like (PK-like) 518 833 IPR011009 -
Lal16g0640 849 SMART blect_4 36 154 IPR001480 -
Lal16g0640 849 ProSiteProfiles Protein kinase domain profile. 533 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0640 849 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 32 302 IPR011047 -
Lal16g0640 849 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 5 849 - -
Lal16g0640 849 CDD B_lectin 36 154 IPR001480 -
Lal16g0640 849 CDD STKc_IRAK 539 804 - -
Lal16g0640 849 Gene3D Phosphorylase Kinase; domain 1 494 608 - -
Lal16g0640 849 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 5 849 - -
Lal16g0640 849 ProSiteProfiles PAN/Apple domain profile. 336 430 IPR003609 -
Lal16g0640 849 Pfam Protein tyrosine and serine/threonine kinase 536 800 IPR001245 GO:0004672|GO:0006468
Lal16g0640 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 185 IPR036426 -
Lal16g0640 849 Pfam PAN-like domain 354 415 IPR003609 -
Lal16g0640 849 Gene3D Transferase(Phosphotransferase) domain 1 609 811 - -
Lal16g0640 849 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Lal16g0640 849 CDD PAN_AP_plant 355 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0640 Lal-Chr16 4085610 4089929 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0640 521 816 Receptor kinase-like Gene Family AT4G23230 62.626 1.73e-130 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal16g0640 PK_Tyr_Ser-Thr 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0640 - - cam:101504189 1171.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0640 16 4085610 4089929 Lal11g0129 11 855306 859327 PCT
Lal3g0057 3 344188 353212 Lal16g0640 16 4085610 4089929 PCT