Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0638 ATGGGATGTGTCACTAGCCTCCTCAACACCTTCCTCTTTTGGTTCTCAACTTTACTCATTTGTCTCTCCACAATCTCAATCTCTGCAGATACCTTAACAACAACCCAATCCCTCACAACCAACCAAACCCTTTCATCACCACAGGGAATTTTTGAGCTGGGTTTCTTTTCTTACACCAATTTCACATGGTACTTAGCCATATGGTACAAAAACATAGATCATAAAACAGTGGTTTGGGTAGCAAATAGAGACACCCCACTTGAAAATCCCACAGGATTTCTCAAAATAGGTGACAAAGGAAACACCATAGTTCTCATAGATCAATCCTTACATCCCATATGGTCCTCCTCAAATCAAACCACAACAACAACAACAACATCTACTAGGAACACAATTCTTCAGCTTTTGGATTCTGGCAACTTGGTTCTGAAAGAATCAAATGAAAATGACCCTACAAAGTTTCTTTGGCAAAGCTTTGATTACCCTACAGATACTTTGTTACCTGGCATGAAGCTAGGGTGGAACTTAGACATAGGAATGGAGAGGCACATAACATCATGGCAGATCAAAGATAAAGACCCTTCAAGTGGTGATTTATCTTTCAAGCTAAATTACCATGGTCTCCCAGAGATTTTTCTTTGGAACAAAGATCAAATAATATATAGAAGTGGACCTTGGAATGGTGAGAGATTCAGTGGGGTACCAGAGATGCAACCTACCACAAGTTCTATTAAATTCATCTTTCATGTTGATGAACATGAGGTGTACTATACTTTCTCAATTGAGAACCAATTTTTGTTTTCAAGACTCTTTGTGAGTCCAATTGGTGAACTTCAAAGGCTTACTTGGATCCAAAGCACACAAGTTTGGAACAAATTTTGGTATGCACCTAAAGACCAATGTGATGATTATAGAATGTGTGGTCCATATGGTATATGTGACAATAATGCTTCACCAGTTTGTCAGTGTGTGATGGGTTTCCACCCCAAGAATCAGCAAGATTGGAATTTGAGATATGGTTCTGATGGTTGTATGAGGAACAAAGAATTAGATTGTGAGAGTGACAAGTTTTTTAAGCTACAAGATGTGAAATTGCCAGAGACAACCTTGGTGGTTGTAAACAGGAGTATGAACCTTGTGGAATGTGAAAATTTGTGTCATAAGAATTGTTCTTGCACTGCTTATGCTAACATTGAAATTACCAATGGAGGAAGTGGTTGTGTGATTTGGATTGGTGAGCTTATAGATATGAGGCAGTACCCTGCAGGAGGACAAGATATTTATGTCAGATTAGCAGCTTCAGATGTAGGGTTTGGAGGTGGTTCTAACAGGACAAATGATACAGCCAAGGTAGCAGGCATTATAGTTGGAGGTGCAGCTTTAATACTTTTGGCATTGAGTTTCTTTTTCTTATGGAAGAAGAATAAATTGCAATGCATATTAAAAGGGAAGACAAAACATAAAGGTTCTTTACAGAGAAGTCATGAGTTTCTAATGGGTGAGGTGGGATTTCCAAGTAAAAGAGATCAGTCAAGTGAAAGTAACATAGATGATCTAGAGTTGCCATTGTTTGATTTTAATACCATAACAATAGCTACAAACAATTTCTCAGAACATAATAGACTTGGACAAGGAGGCTTTGGTGTTGTTTACAAAGGGATATTGATGGAAGGACAGGAAATTGCTGTGAAGAGATTATCAAAAAATTCTGGGCAAGGGATTGAAGAATTTAAGAATGAGGTTAAATTGCTTGTCAAGCTTCAACACCGAAATCTTGTTCGATTGCTTGGTTGCAGCATTCAGATGGATGAGAAGATGTTGGTGTATGAGTACATGGAAAATAGAAGCCTTGATGGCATTTTGTTTGACAAATCAAAGAGATCCTCACTGGACTGGCAAAGGCGCCTCAGCATTATATGCGGAATCGCGAGAGGGTTACTTTATCTGCATCAAGATTCCAGATTTAGGATCATCCACAGAGATCTCAAGGCAAGTAACATTTTACTTGACAGAGAAATGAACCCAAGGATATCAGATTTTGGGATGGCTAGAATTTTTGTTGCTGATCAGACAGAAGCAAATACAATGAGAGTTGTTGGAACATATGGCTATATGTCCCCGGAGTATGCTATGGATGGGAACTTCTCAGTGAAATCTGATGTTTTTAGTTTTGGAGTTCTTGTGCTGGAGATCATAAGTGGAAAAAAGAACAGAGGATTCTATTATGCTAACAAAGAAAGGAATCTTCTAGGGCATTCATGGAAGCAATGGATAGAAGGAAATGCATTGGAACTAATTGATTCATCTATTGGAGATTTATATTCACCATCTGAAGTTCTTAGATGCATCCAGGTTGGGCTATTGTGTGTACAAGAACGTGCAGAAGATAGACCAACAATGTCTTCAGTGGTTTTGATGTTGAGTAGTGAAACTGCACTAATGCCACAACCCAAAAACCCTGGGTTTTGCTTAGGAAGGAATCTTACAGAAACTGATTCTTCTTCAAATAATTGA 2514 0.3846 MGCVTSLLNTFLFWFSTLLICLSTISISADTLTTTQSLTTNQTLSSPQGIFELGFFSYTNFTWYLAIWYKNIDHKTVVWVANRDTPLENPTGFLKIGDKGNTIVLIDQSLHPIWSSSNQTTTTTTTSTRNTILQLLDSGNLVLKESNENDPTKFLWQSFDYPTDTLLPGMKLGWNLDIGMERHITSWQIKDKDPSSGDLSFKLNYHGLPEIFLWNKDQIIYRSGPWNGERFSGVPEMQPTTSSIKFIFHVDEHEVYYTFSIENQFLFSRLFVSPIGELQRLTWIQSTQVWNKFWYAPKDQCDDYRMCGPYGICDNNASPVCQCVMGFHPKNQQDWNLRYGSDGCMRNKELDCESDKFFKLQDVKLPETTLVVVNRSMNLVECENLCHKNCSCTAYANIEITNGGSGCVIWIGELIDMRQYPAGGQDIYVRLAASDVGFGGGSNRTNDTAKVAGIIVGGAALILLALSFFFLWKKNKLQCILKGKTKHKGSLQRSHEFLMGEVGFPSKRDQSSESNIDDLELPLFDFNTITIATNNFSEHNRLGQGGFGVVYKGILMEGQEIAVKRLSKNSGQGIEEFKNEVKLLVKLQHRNLVRLLGCSIQMDEKMLVYEYMENRSLDGILFDKSKRSSLDWQRRLSIICGIARGLLYLHQDSRFRIIHRDLKASNILLDREMNPRISDFGMARIFVADQTEANTMRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIISGKKNRGFYYANKERNLLGHSWKQWIEGNALELIDSSIGDLYSPSEVLRCIQVGLLCVQERAEDRPTMSSVVLMLSSETALMPQPKNPGFCLGRNLTETDSSSNN 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0638 837 Pfam Receptor serine/threonine kinase 492 526 IPR022126 GO:0004674
Lal16g0638 837 ProSiteProfiles PAN/Apple domain profile. 352 432 IPR003609 -
Lal16g0638 837 PANTHER - 17 836 - -
Lal16g0638 837 Gene3D Hepatocyte Growth Factor 350 429 - -
Lal16g0638 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 187 IPR036426 -
Lal16g0638 837 CDD STKc_IRAK 542 807 - -
Lal16g0638 837 Pfam S-locus glycoprotein domain 221 331 IPR000858 GO:0048544
Lal16g0638 837 SMART serkin_6 536 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0638 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Lal16g0638 837 PIRSF SRK 2 837 IPR024171 GO:0004674
Lal16g0638 837 Gene3D Phosphorylase Kinase; domain 1 502 611 - -
Lal16g0638 837 Pfam PAN-like domain 352 417 IPR003609 -
Lal16g0638 837 ProSitePatterns Protein kinases ATP-binding region signature. 542 564 IPR017441 GO:0005524
Lal16g0638 837 ProSiteProfiles Bulb-type lectin domain profile. 29 156 IPR001480 -
Lal16g0638 837 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 836 - -
Lal16g0638 837 Pfam Protein tyrosine and serine/threonine kinase 539 805 IPR001245 GO:0004672|GO:0006468
Lal16g0638 837 Gene3D Transferase(Phosphotransferase) domain 1 612 816 - -
Lal16g0638 837 SMART ntp_6 352 431 IPR003609 -
Lal16g0638 837 CDD PAN_AP_plant 350 432 - -
Lal16g0638 837 Gene3D - 23 159 IPR036426 -
Lal16g0638 837 ProSiteProfiles Protein kinase domain profile. 536 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0638 837 SUPERFAMILY Protein kinase-like (PK-like) 515 807 IPR011009 -
Lal16g0638 837 CDD B_lectin 44 162 IPR001480 -
Lal16g0638 837 Pfam Domain of unknown function (DUF3403) 809 835 IPR021820 GO:0004674
Lal16g0638 837 ProSiteProfiles EGF-like domain profile. 297 333 IPR000742 -
Lal16g0638 837 Pfam D-mannose binding lectin 76 188 IPR001480 -
Lal16g0638 837 SMART blect_4 35 162 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0638 Lal-Chr16 4070696 4080232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0638 524 830 Receptor kinase-like Gene Family AT4G11530 61.489 5.55e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal16g0638 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0638 - - aprc:113860154 1315.06