Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0628 ATGGATATCCCTTCCTCTTTCAATTTTCTAACAGAGTTCGGTTGTGGCTATGTTCTTCTCGGTTGTTTCTCCAAATTTCTCAACTCGCTCGGCATGTTTCTCATGTGCTTGTTCTGTTTCAAGGTTTTCCGTTTTGGTTGGTATTCCAAGAGTTTGTTACGATTTCAAAGCGATTTTGGAGCCATACCCAGAATTCGTTTGTGTTTGGAAAACGGGGTTTGGCAAATTTCTGGATCAAAGATTGCATCTTTAGAAAATGCGAGCGATGACCCTTTGATATTCAAATCTTCTACTAAGAATGTAAATTCTAAGAGTGATATGAGTTTTACTGTTGCTAAAGGGAAAATGAATGTTAATTGGGAAGAGGGTTTTGAAGGGAAAGATGACACTCATGAGAGTGAAAGAGAGGTTGTTGGTGAGGATGAGGTGTTAGACGTAATGGCGCTCAGAAAATTGGTCAAGACTGAGAGGCAAAAAGCTGATGCAGCATTTGCAGAGCTTGAGAAGGAAAGAACAGCAGCTGCTTCATCGGCCGAGGAAGCAATGGCTATGATTTTGAGGGTTCAGAGGGAGAAGTGTTTGGCAGAAATTCAAGCCAATCAGTTTCAGAGAATGGCTGAGCAGAAGCTGGATTATGATCAGGAGGTGATGGAGTCATTCGAGTGGACAATCACGCAGCATGAGTCTCAGAGGAGTTACTTGGAAGAGCAGATAGGGATTTATAGAGAGGAACTGAAGCAGTATCTGAGCGAAGATGAAATAAACCAACTTGAATTTGATATCAGCCGGGATGGTTCAGTACTTAGCTCTTCTGAAACCGAATCACAAACCTTGTAA 837 0.4182 MDIPSSFNFLTEFGCGYVLLGCFSKFLNSLGMFLMCLFCFKVFRFGWYSKSLLRFQSDFGAIPRIRLCLENGVWQISGSKIASLENASDDPLIFKSSTKNVNSKSDMSFTVAKGKMNVNWEEGFEGKDDTHESEREVVGEDEVLDVMALRKLVKTERQKADAAFAELEKERTAAASSAEEAMAMILRVQREKCLAEIQANQFQRMAEQKLDYDQEVMESFEWTITQHESQRSYLEEQIGIYREELKQYLSEDEINQLEFDISRDGSVLSSSETESQTL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0628 278 Pfam Zein-binding 148 238 IPR007656 -
Lal16g0628 278 ProSiteProfiles GTD-binding domain profile. 144 242 IPR007656 -
Lal16g0628 278 PANTHER PROTEIN FLOURY 1-LIKE 7 262 IPR040284 -
Lal16g0628 278 Coils Coil 150 170 - -
Lal16g0628 278 PANTHER BNAANNG28530D PROTEIN 7 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0628 Lal-Chr16 4026631 4027467 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0628 - - lja:Lj4g3v0388260.1 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0628 16 4026631 4027467 Lal15g0550 15 3825872 3826983 LSH
Lal16g0628 16 4026631 4027467 Lal3g0044 3 273753 277463 PCT
Lal16g0628 16 4026631 4027467 Lal11g0101 11 655898 657770 PCT
Lal3g0044 3 273753 277463 Lal16g0628 16 4026631 4027467 PCT
Lal11g0101 11 655898 657770 Lal16g0628 16 4026631 4027467 PCT