Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0624 ATGGCTCGCCGTAGCTCCGGTGGAAGATCTGCTCGTCCAGCTCCACGTGCAGCACCAGCTCGACCTGCTCCTCAGCCAGTCAACCACGCTCCTCCTCCAGCTACTGTTCAGAGTGGTGGTGGATCTCTTCTTGGTGGCATTGGTTCAACCATAGCTCAAGGTATGGCTTTTGGCACTGGAAGTGCAGTGGCACACAGGGCTGTGGATGCTGTGATGGGCCCTCGTACTGTCCAACATGAAGTAGCTAGCACCGCTGGTGCTGCCCCTGCACCCACTGCAAATACTTTTGGTGGTGATGCGTGTAATATTCATTCAAAGGCATTCCAAGATTGTATTACCAACTATGGGAATGAGATCAGCAAGTGCCAGTTTTACATGGATATGCTCGCTGAGTGCAGAAAGAACTCTGGAACCTCATTGAACGCATAA 429 0.5198 MARRSSGGRSARPAPRAAPARPAPQPVNHAPPPATVQSGGGSLLGGIGSTIAQGMAFGTGSAVAHRAVDAVMGPRTVQHEVASTAGAAPAPTANTFGGDACNIHSKAFQDCITNYGNEISKCQFYMDMLAECRKNSGTSLNA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0624 142 Pfam CHCH domain 101 135 IPR010625 -
Lal16g0624 142 MobiDBLite consensus disorder prediction 1 43 - -
Lal16g0624 142 PANTHER - 1 136 - -
Lal16g0624 142 MobiDBLite consensus disorder prediction 17 31 - -
Lal16g0624 142 PANTHER COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0624 Lal-Chr16 3998193 4000478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0624 - K22759 jre:108983913 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0624 16 3998193 4000478 Lal15g0547 15 3808670 3811213 LSH
Lal16g0624 16 3998193 4000478 Lal23g1006 23 11939351 11948859 LSH