Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0621 ATGGCAGCATGCTTGAAACCACCTAACAGTGAAGATGACTCTGTGATACTCTTTTCAACTTCTAATTCTCCTGAATATTCCACCAGTCCCTCTTCTTCTTTCTACCATTCACCACCACCATCATTCAGAACTGCATACAAACTTTCTATAAAAAACCTCTCCTATACTTTGCACCCACATAACTCCACTCCTTTTCCATTTTGTCACCTCACTAAAAAACCCAAACCAGTAACAATACTCAAGTCAGTCTCCTTTGTTGCCAGAATATCTGAGATTGTTGCTGTTGTTGGTCCCAGTGGCACAGGGAAGTCTACCCTTCTTCGGATAATCGCCGGAAGGGTAAAAGATAATGACTTCAATCTTAATAGCATCTCAATCAATGATCATCCAATGACCAGTCCATCTCAGTTGAGGAAGATATGTGGTTTCGTGGCACAAGAGGACAACTTGCTTCCTCTTCTAACTGTCAAAGAAACTTTGTTGTTTAATGCCAAGTTTAGGCTAAAAGAAATGACACCAAAGGATAGAGAAATGAGAGTGGAAAGCTTGATGCAAGAGCTAGGCCTTTTTCATGCTGCGGATAATTTTGTTGGGGATAAAGAGAATAGAGGGATATCTGGTGGAGAGAGGAAAAGGGTATCAATTGGAGTTGATATGATTCACAATCCTCCAATTTTACTCCTAGATGAGCCAACATCAGGCCTAGATAGCACTTCAGCTCTCCATGTGATAGAGCTTCTGTCATCAATGGTTAAAGCAAAGCGAAGGACAGTGGTTCTGTCAATCCACCAACCCAGCTATAGAATATTGCATTACATTTCCAAGTTCTTGATCCTCTCCCATGGTTCAGTTGTTCATAATGGTAGCCTACAATCACTTGAGGAAGCCATAAGTAAGTTGGGATTTCAAATTCCATTACAACTAAATGCATTAGAATTTTCCATGGAGATTATATGTAGGTTAGAAGAATCCAGTTCAAAACATGAAACTCTGTCCAACATTGATGAAAAAGAGCCATTTCCAAATCCTATGTGGCCAGAAGAACAAAATGGAGGAGTCCAATCAAATTGTAAGAGGGAAAGTTTTAGCAGTTTTTGCTATGCAAACTTGATTGAGATATTGTTTCTCTGCTCAAGATTTTGGAAGATAATTTATAGAACAAAGCAACTTTTCTTGGCAAGAACAATGCAAGCCTTAGTTGGTGGATTTGGGCTAGGAAGTGTTTACATAAAGGTAAGAAATGATGAAGGGGGAGTTGCAGAAAGGTTAGGTCTGTTTGCATTTAGTCTTAGTTTCCTGTTATCTTCTACAGTTGAAGCACTTCCAATATACCTTCAAGAGAGGTGTGTTCTAATGAAGGAGTCTTCAAGGGGAGCCTATAGGATTTCTTCTTACATGATAGCCAACACTTTTGTTTTCCTTCCTTTCTTGTTTGTAGTATCTATTCTTTTTGCAGTTCCTGTGTATTGGATTGTAGGACTCAATCCTTCCCTCACTGCCTTCACCTTCTTCATTTTCGTGGTTTGGCTCATCGTACTCATGGCGAGTTCTCTAGTACTCTTCTTAAGCGCAGTCTCTCCTGATTTCATCTCCGGGAATTCGCTTATCTGCACTGTTCTTGGAGCTTTCTTCCTCTTCTCCGGATATTTCATACCGAAGGAGAGCATTCCGAAATATTGGCTTTTCATGTACTATGTGTCCCTTTATAGATACCCTTTGGATGCGCTCCTCACAAATGAGTACTGGAATGTTAGACATGAGTGTTTCTCACAACAAGATACAACAACAAATGGATCTCAATGTTTGATTACAGGATTTGATGTGCTCAAGAGTAGAGGACTTGAAAAGGACAATAGGTGGGTGAATGTGGGAATCATGATAGGATTCTTTGTGTTCTATCGTCTGCTTTGTTGGATCATACTCGCTCGAAAGGCCTCCAAGACAACAATATAA 1953 0.3999 MAACLKPPNSEDDSVILFSTSNSPEYSTSPSSSFYHSPPPSFRTAYKLSIKNLSYTLHPHNSTPFPFCHLTKKPKPVTILKSVSFVARISEIVAVVGPSGTGKSTLLRIIAGRVKDNDFNLNSISINDHPMTSPSQLRKICGFVAQEDNLLPLLTVKETLLFNAKFRLKEMTPKDREMRVESLMQELGLFHAADNFVGDKENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALHVIELLSSMVKAKRRTVVLSIHQPSYRILHYISKFLILSHGSVVHNGSLQSLEEAISKLGFQIPLQLNALEFSMEIICRLEESSSKHETLSNIDEKEPFPNPMWPEEQNGGVQSNCKRESFSSFCYANLIEILFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYIKVRNDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERCVLMKESSRGAYRISSYMIANTFVFLPFLFVVSILFAVPVYWIVGLNPSLTAFTFFIFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYYVSLYRYPLDALLTNEYWNVRHECFSQQDTTTNGSQCLITGFDVLKSRGLEKDNRWVNVGIMIGFFVFYRLLCWIILARKASKTTI 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0621 650 Pfam ABC-2 type transporter 263 327 IPR043926 GO:0140359
Lal16g0621 650 PANTHER ABC TRANSPORTER G FAMILY MEMBER 23 3 643 - -
Lal16g0621 650 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 643 - -
Lal16g0621 650 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 297 IPR027417 -
Lal16g0621 650 Gene3D - 66 311 IPR027417 -
Lal16g0621 650 Pfam ABC transporter 80 233 IPR003439 GO:0005524
Lal16g0621 650 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 65 306 IPR003439 GO:0005524
Lal16g0621 650 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524
Lal16g0621 650 Pfam ABC-2 type transporter 373 581 IPR013525 GO:0016020|GO:0140359
Lal16g0621 650 SMART AAA_5 89 311 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0621 Lal-Chr16 3995185 3997137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0621 77 293 Calmodulin-binding Proteins AT2G36910 29.680 1.49e-12 69.3