Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0598 ATGGTTGTTTCTAATTACAAGATTGCCACTATGTTGCTTTATGCAGTGTTAGCCCTTCAGTTCTTTCACACACCCACAGTGAGTGAGCTTGTACAAGAGCAACCTCTGATTCTCAAGTACCACAACGGCCAGCTCCTGAAAGGACAGATCACCGTTAATCTAATCTGGTACGGTTCCTTTACCCCAATCCAACGCTCCATAATCGTCGACTTCATTAACTCCCTTTCATATTCCTCATCTCCGCTTCCCTCCGCTTCATCGTGGTGGAAAACAACTGAGAAATATAAAGGAGGATCCTCTGTTCTCGTCGTAGGAAAACAGTTCCTGCACCCTGCTTATACCCTCGGTAAAAATTTGGGGGGGAAAGACCTTCTTGCCCTTGCCTCTAAGTTCAACCAACTTTCCTCTATAACTGTTGTGTTAACTGCTAAAGACGTTGCAGTTGAAGGGTTTTGTGTGAGCAGGTGTGGGACCCACGGGTCGACCCGGAACGTTAACGGGAAGCTAAGAAGTGCTTATATTTGGGTTGGGAACTCTGAGACTCAGTGTCCAGGGCAATGCGCGTGGCCGTTTCACCAGCCGTTATATGGTCCTCAGACGCCGCCGTTGGTGGCGCCTAACGGGGATGTTGGTGTTGATGGGATTATTATCAACCTGGCTACTCTTCTTGCTGGCACCGTCACAAATCCGTTTAATAATGGGTATTTTCAGGGTCCGGCGACGGCGCCGCTGGAGGCAGTTACGGCTTGCACTGGTGTTTTTGGGACTGGGTCATATCCTGGTTATCCGGGTCGGGTCATTGTGGATAAGGTTACCGGAGCAAGTTTCAATGCGCATGGGGCGAACGGGAGGAGGTTTCTGTTACCGGCGATGTGGGACCCTCAGACCCAATCATGTAAGACTCTTGTGTGA 912 0.4967 MVVSNYKIATMLLYAVLALQFFHTPTVSELVQEQPLILKYHNGQLLKGQITVNLIWYGSFTPIQRSIIVDFINSLSYSSSPLPSASSWWKTTEKYKGGSSVLVVGKQFLHPAYTLGKNLGGKDLLALASKFNQLSSITVVLTAKDVAVEGFCVSRCGTHGSTRNVNGKLRSAYIWVGNSETQCPGQCAWPFHQPLYGPQTPPLVAPNGDVGVDGIIINLATLLAGTVTNPFNNGYFQGPATAPLEAVTACTGVFGTGSYPGYPGRVIVDKVTGASFNAHGANGRRFLLPAMWDPQTQSCKTLV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0598 303 Pfam Phosphate-induced protein 1 conserved region 38 302 IPR006766 -
Lal16g0598 303 PANTHER PROTEIN EXORDIUM-LIKE 5 17 303 IPR006766 -
Lal16g0598 303 PANTHER PROTEIN EXORDIUM-LIKE 2 17 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0598 Lal-Chr16 3864334 3865245 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0598 - - gmx:100810770 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0598 16 3864334 3865245 Lal15g0530 15 3693582 3694490 LSH
Lal16g0598 16 3864334 3865245 Lal23g1017 23 12006892 12013073 LSH
Lal16g0598 16 3864334 3865245 Lal5g1814 5 19966541 19967452 PCT
Lal5g1814 5 19966541 19967452 Lal16g0598 16 3864334 3865245 PCT