Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0590 ATGTCTAGAAACGATTTGAAGCTTGTGGGTAGTTGGTACAGTCCATTTGTTGTGAGGGTGCATATTGCACTAAACATCAAATCTTTAGATTATGAAAATATTGAAGAAACCTTGTATCCCAAAAGTGACTTGCTCCTTCACTCCAACCCTGTGCATAAGAAAATCCCAGTTCTCCTCCATGCTAATCAACCCATTTGTGAATCTGACATTATAATTCAGTATATTGATGAGATTTGGACTCATGCTCCTTCTATCCTTCCTCAAAATGCTTATGATCGAGCTAATACTCGCTTCTGGGTTTCCTACATCGATAACAAGTTGTTTCCGTCCATGAAAAAGATTCTATTTGCTGAAGATGAAGCAAAGAAAACACACTTTATTGAAGTGGAAGAAATGCTTGAGATGATGGAAAATGTGTTAAAGAAAGAGAGTAATGGAAAAGACTATTTTGGTGGAGATAATATTGGATTCATTGATATTGCTTTTGGTAGCTTGTGGAGTTGGTTTAGTGTTATAGAAGAGTTGAATGGAAGGAAGGTGCTTGTTGAGCCAAAGTTCCCAGCTTTGGTCAAATGGGCTGAGACCTTTGCAAATCATCCTGCAGTAAAGGGTTTCTTACCAGAGACTCACAAGCTTATTCAGCATGCAAAGGTTATGCAGCTAAGACATGCTGCTGCTTTCAAGTAA 687 0.3828 MSRNDLKLVGSWYSPFVVRVHIALNIKSLDYENIEETLYPKSDLLLHSNPVHKKIPVLLHANQPICESDIIIQYIDEIWTHAPSILPQNAYDRANTRFWVSYIDNKLFPSMKKILFAEDEAKKTHFIEVEEMLEMMENVLKKESNGKDYFGGDNIGFIDIAFGSLWSWFSVIEELNGRKVLVEPKFPALVKWAETFANHPAVKGFLPETHKLIQHAKVMQLRHAAAFK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0590 228 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Lal16g0590 228 SFLD Main.3: Omega- and Tau-like 2 223 IPR045073 -
Lal16g0590 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 227 IPR010987 -
Lal16g0590 228 Pfam Glutathione S-transferase, C-terminal domain 106 200 IPR004046 -
Lal16g0590 228 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 216 - -
Lal16g0590 228 SFLD Main (cytGST) 2 223 - -
Lal16g0590 228 CDD GST_N_Tau 6 79 - -
Lal16g0590 228 SUPERFAMILY GST C-terminal domain-like 77 219 IPR036282 -
Lal16g0590 228 CDD GST_C_Tau 90 219 IPR045074 GO:0004364|GO:0006749
Lal16g0590 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 216 IPR045073 -
Lal16g0590 228 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Lal16g0590 228 Gene3D - 86 227 - -
Lal16g0590 228 Gene3D Glutaredoxin 1 85 - -
Lal16g0590 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0590 Lal-Chr16 3823443 3825086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0590 1 217 Glutathione S-transferase Gene Family AT1G10360 51.142 6.73e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0590 K00799 - gmx:100805908 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0590 16 3823443 3825086 Lal16g0590 16 3823443 3825086 ECH