Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0552 ATGGAAGAACATCTCACTCCATTGGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTCCCAATGGGTCTATGCTGTCTTTTGGAGGATCTTGCCTAGAAACTACCCACCACCCAAGTGGGAAGGTCAGGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTGGATATTGGCGTGGGAAGATGGTTTCTGCAACTTTACAGCCTCAGGAGTAGCACCTGAAATTATCAATAATGGTGATTGTCCTACCTCATCAGTTTATGGGAACTGTGATCAATTCCAGCCCTACCAAGGGCTTCAACCAGACCTCTTTTTCAAGATGTCACATGAGATCTATAACTATGGAGAAGGGTTGATAGGAAAAGTGGCTGCAGATCAGAGTCACAAGTGGATATACAAAGAACCTAATGATCAAGAAATTAACTTCTTGTCAGCATGGCACAATTCAGCAGACTCGCACCCTAGGACTTGGGAAGCACAGTTCCAATCTGGTATAAAGACCATAGCCCTTATTGCTGTAAGAGAGGGTGTTGTTCAGTTAGGAGCAGTTCACAAGGTGATTGAAGACCTGAGCTATGTGGTGCTATTGAGAAAAAAGTTCAGTTACATTGAAAGCATCCCAGGTGTGCTTTTACCACATCCATCATCATCTGCATATCCTTATAAAGTGGAAGAATACACTGTTCCAGAACAGTGGCATTTCCAAGGGAGCCTTGCAGCACCACCAGTTGAACTATATGACCGCTTCAACATGCAGCCGTTGAAGATAACTCCGTCAATGAGCAGCCTTGAGGCACTACTCTCTAAGCTCCCCTCAGTCGTGCCGCCACCGCAATCATCAACACAGCCACAGTCACATGTTTTGCCACAATCTCAAAGGCCATTGGAATCAATGGGAATGGAAAAAGTGGCAAAGGAAGAGTTAGATGAAGAGGGATATAGGCCTGAACTGGATATGGGAGAGAGTAGTAGTTCTATGCCTAGTTATCATCATCAACATCATTTCCACCAGTAA 1038 0.4441 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILAWEDGFCNFTASGVAPEIINNGDCPTSSVYGNCDQFQPYQGLQPDLFFKMSHEIYNYGEGLIGKVAADQSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFQSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEEYTVPEQWHFQGSLAAPPVELYDRFNMQPLKITPSMSSLEALLSKLPSVVPPPQSSTQPQSHVLPQSQRPLESMGMEKVAKEELDEEGYRPELDMGESSSSMPSYHHQHHFHQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0552 345 MobiDBLite consensus disorder prediction 281 300 - -
Lal16g0552 345 MobiDBLite consensus disorder prediction 280 345 - -
Lal16g0552 345 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 208 IPR025610 -
Lal16g0552 345 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 342 - -
Lal16g0552 345 MobiDBLite consensus disorder prediction 307 325 - -
Lal16g0552 345 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0552 Lal-Chr16 3555853 3559147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0552 15 208 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.795 1.97e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0552 - - vun:114173114 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0552 16 3555853 3559147 Lal16g0552 16 3555853 3559147 ECH
Lal16g0552 16 3555853 3559147 Lal15g0498 15 3443209 3445783 LSH