Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0548 ATGGACCTGGAAAGTAGGACTCATCGTAACTCTGCAAAGAGAGAATCATGGAAAACTGTGTTGACTCTGGCATATCAGAGTCTTGGAGTTGTGTATGGAGACTTGAGCACTTCACCTTTGTACGTGTTCAGGAACACTTTTAGTGAAGCTATTAATCACACTGAGACAAATGAAGAGATCTATGGTGTGTTGTCTTTGGTGTTTTGGACATTAACTTTGGTCCCTTTGTTGAAATATGTGTTGATAGTGCTGAAAGCTGATGATAATGGAGAAGGAGGCACATTTGCTTTGTACTCTTTGCTGTGTAGACATGCCAAAGTTAGTTCACTGCCAAATTGCCAGGTGGCAGATGAGGAGCTCTATGAATACAAGAATGAAATTGCCCCTGAGAGAAGCTTTGCATCCAGGTTAAAGTCTACTTTGGAGAAGAACAAGGTTCTTCAGAGGATTTTGCTTGTTCTTGCTTTGATTGGAACTTCTATGGTTATTGGTGATGGTGTCCTGACACCAGCCTTATCTGATGTAGAAGTTCCAGCCGCGTGCATCATACTGATAGGCTTGTTCGCCCTTCAACATTATGGCACTCACAGGGTCGGCTTCTTGTTTGCTCCTATAGTTATCACATGGCTTTTCTGCATTGGTGCCATTGGTGTTTATAATATATTACACTGGAACCATCATATATACAAAGCACTCTCTCCATATTATTTTTTCCAATTTTTAAGGAACACTCAGAATGAAGGTTGGATGGCCCTTGGTGGAATTTTGCTGTGCATAACTGGATCAGAAGCCATGTTTGCTGATCTTGGGCATTTTTCACAATTATCAATCAAGATTGCTTTCACCTCTGTGGTTTATCCATCTCTAATTCTTGCATATATGGGGCAAGCTGCTTATCTAACTAGACATCATGATGTTCAGAATGACCGTCACTTTGGATTTTATATATCTGTACCAGAGAAATTGAGATTGCCTGTCTTTGTGATAGCAATACTTGCTGCAGTTGTGGGAAGCCAAGCCATCATCACTGGAACTTTCTCAATTATCAAGCAATGCTCTGCATTAAGTTGCTTCCCTAGAGTTAAAGTGGTTCACACGTCATCCAAAATTCATGGGCAAATATATATCCCCGAGGTCAATTGGCTATTGATGCTCTTGTGTTTGGCTGTAACCATTGGTTTTAGAGACACAAAGCATATGGGCAATGCAACAGGTTTAGCATTTATCACAGTAATGCTGGTCACAACATCTTTGATGTCACTGGTTATTGTACTGTGCTGGCATAAGAATGTTCTCCTCGCACTTGGGTTTGTTTTCGTATTTGGCACCATTGAGGCTCTCTTCTTCTCAGCTTCTCTTATCAAGTTCCTGGAAGGAGCATGGGTTCCAGTTGCATTAGCATTTGTGTTTCATACTGTCATGTATGTTTGGCACTATGGCACACTTAAAAAGTATGAATTTGATGTTCAAAACAAGGTTTCCATCAGCTGGCTACTCAAGCTAGGTGCCAGCATAGGTATTGTACGAGTACGCGGCATTGGCCTTATACATACTGACCTAGTGTCTGGAATTCCTGCAATCTTCTCCCACTTTGTAACCAACCTGCCAGCCTTCCATCAGGTCCTAGTTTTTCTCTGCATCAAACATGTACCAGTACCACATGTTAGACCTGAGGAGCGGTTTCTAGTCGGTCGTGTAGGTTCAAGAGATTTCAGATTATACCGGTGCATAGTTCGATATGGATACCGTGATATCCACAAAGATGACATTGAGTTTGAGAATGATCTTGTTTGCAGCATAGCAGAGTTCATACGCTCGGGGAGCTCTTCAAGCGACGAGTTTGAGAAGGATGACAAAATGGCAGTTGTTGGAACATGTTCTACTCATTCCATTTTGATGAGTGAAGATAGTGTGGGTGATGTTGATAATGTAGACACAGCCTGGACTTCAGAGGTCAAGGAGATAAAGTCACCCGCAGGGACTTCAGAGCCTGTGGAGATAAAGTCACCTCATGTCAGTAGGAAAAGAGTAAGGTTTTTTGTGCCAGAGAGTCCTAAGATTGACACAGCTGCAATGAGAGAGTTGGAAGAGCTAACAGAAGCAAGGGAATCCGGGGTAGCTTATATTACAGGACAACCATACATGAAAGCCAAACTAGGGTCTAGTATGCTGAAGAAATTGGTTATAAATTATGTGTATGAATTCCTAAGGAGGAATAGCAGGGCGCCCTCTTTTGTAACTGTACCTCACGTTTCATCTCTGGAAGTTGGGATGATGTACCAAGTTTAA 2289 0.4198 MDLESRTHRNSAKRESWKTVLTLAYQSLGVVYGDLSTSPLYVFRNTFSEAINHTETNEEIYGVLSLVFWTLTLVPLLKYVLIVLKADDNGEGGTFALYSLLCRHAKVSSLPNCQVADEELYEYKNEIAPERSFASRLKSTLEKNKVLQRILLVLALIGTSMVIGDGVLTPALSDVEVPAACIILIGLFALQHYGTHRVGFLFAPIVITWLFCIGAIGVYNILHWNHHIYKALSPYYFFQFLRNTQNEGWMALGGILLCITGSEAMFADLGHFSQLSIKIAFTSVVYPSLILAYMGQAAYLTRHHDVQNDRHFGFYISVPEKLRLPVFVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVVHTSSKIHGQIYIPEVNWLLMLLCLAVTIGFRDTKHMGNATGLAFITVMLVTTSLMSLVIVLCWHKNVLLALGFVFVFGTIEALFFSASLIKFLEGAWVPVALAFVFHTVMYVWHYGTLKKYEFDVQNKVSISWLLKLGASIGIVRVRGIGLIHTDLVSGIPAIFSHFVTNLPAFHQVLVFLCIKHVPVPHVRPEERFLVGRVGSRDFRLYRCIVRYGYRDIHKDDIEFENDLVCSIAEFIRSGSSSSDEFEKDDKMAVVGTCSTHSILMSEDSVGDVDNVDTAWTSEVKEIKSPAGTSEPVEIKSPHVSRKRVRFFVPESPKIDTAAMRELEELTEARESGVAYITGQPYMKAKLGSSMLKKLVINYVYEFLRRNSRAPSFVTVPHVSSLEVGMMYQV 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0548 762 TIGRFAM kup: potassium uptake protein 23 762 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lal16g0548 762 Pfam K+ potassium transporter 25 584 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lal16g0548 762 PANTHER POTASSIUM TRANSPORTER 6 1 762 - -
Lal16g0548 762 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 762 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0548 Lal-Chr16 3507766 3519991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0548 1 762 Inorganic Solute Cotransporters AT1G70300 69.279 0.0 1120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0548 K03549 - gmx:100793141 1201.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0548 16 3507766 3519991 Lal16g0548 16 3507766 3519991 ECH
Lal16g0548 16 3507766 3519991 Lal15g0493 15 3396644 3401513 LSH
Lal22g0792 22 5811980 5819166 Lal16g0548 16 3507766 3519991 PCT
Lal6g0884 6 6091241 6099524 Lal16g0548 16 3507766 3519991 PCT