Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0529 ATGGAACTTACTGGTTTAGTTCTCTGGCTACTGTGTTTGCTTCTTCTTATGCTGATGGAGGTGTCTTTTGCTGCTCTTTCTCCTTCTGGCATAAACTATGAAGTTGTAGCTCTAATGGGAATAAAGAATAACTTGGTTGATCCACACAATGTCCTGGAAAATTGGGATAGTAATTCTGTTGATCCGTGTAGCTGGAGAATGATTACTTGTACTCCTGATGGCTATGTTTCTGCATTGGGATTGCCTAGTCAGAATTTGTCTGGTACACTATCTCCTTGGATTGGAAACCTTACTAACTTACAATCTGTGTTGCTTCAGAATAATGACATTTCTGGTCGGATACCCGCTGCAATAGGAAGCCTGGAAAAGCTTCAGACACTTGACCTTTCCAGTAATGCATTTAGTGATGAGATACCGAGTTCTTTTGGAGGCCTGAAGAACCTGAATTATTTGAGGTTGAATAATAACAGCCTTACAGGAGCCTGCCCTCAGTCTCTTAGCAATATTGAAGGTCTAACTCTTGTGGACCTCTCATACAATAATCTTAGTGGCTCCTTTCCAAGAATATCAGCAAGAACATTAAAAATTGTGGGTAACCCATTAATTTGTGGTCCAAAAGAAAGCAACTGTTCTACTGTTTTACCAGAGCCACTTTCCTTCCCACCAGACGCACTAAGAGGCCAACCAGACTCGGGTAAAAAAGGCCACCATGTAGCAGTTGCTTTTGGTGCAAGCTTTGGGGCTGCTTTTGTCGTTGTGATTATTGTTGCGTTTCTTGTTTGGTGGCGGTACAGACACAACCAGCAAATATTTTTTGATGTTAATGAGCAATACGACCCTGAGGTGCGCCTTGGTCATTTGAAAAGGTTTACATTCAAAGAGCTTCGAGCTGCAACAAACCATTTCAACTCAAAGAATATTCTAGGAAGAGGTGGCTTCGGAATAGTTTACAAGGCATCCTTGAATGATGGATCTGTTGTGGCTGTCAAAAGGTTGAAGGACTACAATGCAGCTGGTGGTGAGATCCAATTTCAGACAGAAGTTGAGACAATAAGTTTGGCTGTCCACCGGAATCTTCTGAGGCTTTGTGGGTTTTGCAGTACTCAGAATGAAAGGCTCCTTGTTTATCCATATATGTCTAATGGCAGTGTTGCCTCAAGATTAAAAGATCACATTCATGGTCAGCCAGCTTTAGATTGGACAAGGCGGAAGAGTATAGCTTTAGGTACAGCAAGAGGGTTGGTTTATTTGCATGAGCAATGTGACCCTAAAATTATTCACCGTGATGTCAAAGCGGCCAACATATTGCTAGACGAAGACTTTGAAGCAGTTGTTGGTGATTTCGGTTTAGCTAAGCTATTGGATCACAGAGATTCTCATGTGACCACTGCTGTGCGTGGCACCGTTGGTCACATTGCTCCAGAGTACCTATCCACAGGCCAGTCATCAGAAAAGACTGATGTGTTTGGCTTTGGAATCTTGCTGCTTGAGCTGATCACAGGTCACAAGGCCGTAGATTTTGGACGAGCAGCAAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTCCACCATGATGGAAGATTGAGTCAAATGGTAGATAAAGATATTAATGGCAACTTTATCATGGCTGAGTTGGAAGAAATGGTTCAGGTTGCACTCTTGTGCACACAATTTAATCCTTCATATCGTCCCAAGATGTCGGAAGTATTAAAGATGTTGGAAGGGGATGGCTTCGCCGAGAGATGGGAGGCTTCACATAGGGTTGAAACACCGAGGTTTCGGCCATGCGAAAATCCTCCTCAAAGATACGCAGATTATATAGAGGAATCTTCACTCATAGTAGAAGCTATGGAGCTCTCTGGTCCTAGGCTTAACTTCCAAAACCCTGTTTTGACTTGTGTCCATGGTGACATTAATGTGGTGATTGGTCCATTGCTAGTGGCTACTACTGTTATGAAAATTCTGATGCTCTATATCATTATAGATTTCATTACCATTTTTTCCTTCAACGTTCTCCGTGGATCTACCACTTCCCTTGCTAATTCCTCGTTCTCTTCTTGGCCATTTTCCTTTTCATCTCACCCTTTTTCCTCTTCTTCTCTAACCAATGCTTCTTCTGTGAGTTGGGTTGAAGAAAAAGGGAAAATAAGTGAAGTGAATGTGTCAAAGGAGGGTTTTGAGAATACCCATTTGAGAAATTTCACTGATAATCATGGTAATTCAAGCTTGCATGATGAAGAACAACGTTTTCCAAAACTAAATTCCTCGGATCCTTCTAGTGGGGTTGTCAAAAATGTAACCTTGATGGCTGCAAAAACAAGGGTTTCAGATGAAGTTGGGACACCAAAAACTATGGAAGGAGATTTGGTTAAGAAGAATAGTGTAACTGTCATTGGTCATGACGCGGATCCAAAAGAGGAGAAAATGCATGTTGGGTTAAAAGGGAAGTGTGACATATTTGATGGTAATTGGGTGAAAGATGATTCAAAGCCATATTATCCCTTAGGTTCTTGTCCTTACATTGATAGAGATTTTAATTGTGACCTTAATGGGAGGCCTGATAGTGAGTATGTGAAATGGAAATGGCAGCCAAATGGGTGTGACATTCCAAGTCTGAATGCAACTGATTTTATGGAGAGGCTGCGAGGACAGAAGCTGGTTTTTGTGGGGGATTCACTGAACAGGAACATGTGGGAATCCTTGGATTATAATTGTTCAATAGATTTTGTTAGTTCACCATTCATTGTCCAAGAATCTACTTTCAAAGGCATAAATGGGTCATTTGAGACATTAAGATTGGATTTGATGGACCAGACAACTTCCATGTATCATGATGCCGATATCATAGTCTTCAATACAGGCCATTGGTGGACACATGAGAAAACATCTAAGGGAGAAGACTATTATCAAGAAGGCAACCACGTATACCCAAGACTCAAGGTTTTGAATGCATATATGAGGGCTTTGACAACGTGGGCTAATTGGATTGACAACAACATTGATGCCAATCGAACTCAGGTTTTCTTTAGAGGATACTCAGTCACCCATTTCAGAGGTGGGCAATGGAATTCAGGAGGACAGTGCAACAAAGAAACCGAGCCAATATTTAATGGAACTCACCTACGGAAATATCCATCGAAAATGAGGGCTTTAGATAATATCATCCGAAAGATGAGAAGTCCAGTGGTATATATGAACATAAGTAGGCTCACCGATTACAGAAAAGATGGGCATCCTTCTATATACAGAATGGAATATAAGACAGCAGAAGAACGGTCCTCTGCCGAGTTACACCAAGATTGCAGTCATTGGTGCTTGCCAGGAGTACCAGATACTTGGAATGAATTATTGTATGCTTCTCTCTTAAAATATGGAAAAGGCAGTTGGGAAACCTGA 3402 0.4148 MELTGLVLWLLCLLLLMLMEVSFAALSPSGINYEVVALMGIKNNLVDPHNVLENWDSNSVDPCSWRMITCTPDGYVSALGLPSQNLSGTLSPWIGNLTNLQSVLLQNNDISGRIPAAIGSLEKLQTLDLSSNAFSDEIPSSFGGLKNLNYLRLNNNSLTGACPQSLSNIEGLTLVDLSYNNLSGSFPRISARTLKIVGNPLICGPKESNCSTVLPEPLSFPPDALRGQPDSGKKGHHVAVAFGASFGAAFVVVIIVAFLVWWRYRHNQQIFFDVNEQYDPEVRLGHLKRFTFKELRAATNHFNSKNILGRGGFGIVYKASLNDGSVVAVKRLKDYNAAGGEIQFQTEVETISLAVHRNLLRLCGFCSTQNERLLVYPYMSNGSVASRLKDHIHGQPALDWTRRKSIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKAVDFGRAANQKGVMLDWVKKLHHDGRLSQMVDKDINGNFIMAELEEMVQVALLCTQFNPSYRPKMSEVLKMLEGDGFAERWEASHRVETPRFRPCENPPQRYADYIEESSLIVEAMELSGPRLNFQNPVLTCVHGDINVVIGPLLVATTVMKILMLYIIIDFITIFSFNVLRGSTTSLANSSFSSWPFSFSSHPFSSSSLTNASSVSWVEEKGKISEVNVSKEGFENTHLRNFTDNHGNSSLHDEEQRFPKLNSSDPSSGVVKNVTLMAAKTRVSDEVGTPKTMEGDLVKKNSVTVIGHDADPKEEKMHVGLKGKCDIFDGNWVKDDSKPYYPLGSCPYIDRDFNCDLNGRPDSEYVKWKWQPNGCDIPSLNATDFMERLRGQKLVFVGDSLNRNMWESLDYNCSIDFVSSPFIVQESTFKGINGSFETLRLDLMDQTTSMYHDADIIVFNTGHWWTHEKTSKGEDYYQEGNHVYPRLKVLNAYMRALTTWANWIDNNIDANRTQVFFRGYSVTHFRGGQWNSGGQCNKETEPIFNGTHLRKYPSKMRALDNIIRKMRSPVVYMNISRLTDYRKDGHPSIYRMEYKTAEERSSAELHQDCSHWCLPGVPDTWNELLYASLLKYGKGSWET 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0529 1133 SUPERFAMILY L domain-like 32 201 - -
Lal16g0529 1133 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Lal16g0529 1133 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 871 903 IPR026057 GO:0016740
Lal16g0529 1133 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 904 1121 IPR026057 GO:0016740
Lal16g0529 1133 Pfam PMR5 N terminal Domain 818 870 IPR025846 -
Lal16g0529 1133 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Lal16g0529 1133 MobiDBLite consensus disorder prediction 736 760 - -
Lal16g0529 1133 SMART serkin_6 302 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0529 1133 Gene3D Transferase(Phosphotransferase) domain 1 379 594 - -
Lal16g0529 1133 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0529 1133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Lal16g0529 1133 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
Lal16g0529 1133 Pfam Protein kinase domain 303 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0529 1133 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Lal16g0529 1133 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 625 - -
Lal16g0529 1133 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Lal16g0529 1133 PANTHER PROTEIN NSP-INTERACTING KINASE 3 6 625 - -
Lal16g0529 1133 SUPERFAMILY Protein kinase-like (PK-like) 279 576 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0529 Lal-Chr16 3368371 3380046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0529 67 625 Receptor kinase-like Gene Family AT1G60800 76.007 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lal16g0529 Pkinase 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0529 - - gmx:100806943 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0529 16 3368371 3380046 Lal16g0529 16 3368371 3380046 ECH
Lal16g0529 16 3368371 3380046 Lal15g0476 15 3255042 3261006 LSH