Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0526 ATGGAGGAAATGTACGGAGTACCGTCATCATCGATGGCAGATTACGCTGACAAGCCCATGACGACGCCGGAAAATCTGATCTTTCCGGCAGACTATCACAGCTTCCTCATGTCCTCCTCCTCCTCTGGCCGGATTCCCATCTTCGGATCCGATAATCTCTTCTCCTCCGCCGTAGCCTCCTCCGCCGGAATTCAACGACAGCAGGAACAACAGGAACAGTATGACGTTAACACCTCCACAGTGATGAAAGCCAAAATCGCATCTCACCCTCACTACCCTCGCCTCCTCCAAGCTTATATCGATTGCCAGAAGGTAGGGGCACCTCCTGAAATAGCGGGTTTGTTAGAAGAAATCCAGCGAGAAAATGACCTGTGTTGTAAGAGGAACGTTGTTTCCACGTGCTTTGGAGCCGATCCCGAGCTTGACCATTTCATGGAAACATATTGTGACATGCTGGTGAAGTATAAATCAGACCTTGCTCGCCCTTTTGATGAAGCAACTAGCTTCCTTAACAACATAGAAATGCAGCTCAGTCATCTCTGTACTGGTGCTAATTATGTTCCTACCCTTAATTCTGGTATGTTCTATACTTCTTCTCTCTTTAGTCTTTGGCATGACTACAACTCACTAGTCTATAATCTTTCGAAGAAGGGTTTTGAAAAGTTGTGA 669 0.4664 MEEMYGVPSSSMADYADKPMTTPENLIFPADYHSFLMSSSSSGRIPIFGSDNLFSSAVASSAGIQRQQEQQEQYDVNTSTVMKAKIASHPHYPRLLQAYIDCQKVGAPPEIAGLLEEIQRENDLCCKRNVVSTCFGADPELDHFMETYCDMLVKYKSDLARPFDEATSFLNNIEMQLSHLCTGANYVPTLNSGMFYTSSLFSLWHDYNSLVYNLSKKGFEKL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0526 222 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 1 193 - -
Lal16g0526 222 Pfam KNOX2 domain 135 181 IPR005541 GO:0003677|GO:0005634
Lal16g0526 222 SMART KNOX1_2 80 124 IPR005540 GO:0003677|GO:0005634
Lal16g0526 222 SMART KNOX2_2 131 182 IPR005541 GO:0003677|GO:0005634
Lal16g0526 222 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 193 - -
Lal16g0526 222 Pfam KNOX1 domain 82 123 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0526 Lal-Chr16 3343137 3353735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0526 1 183 Homeobox Transcription Factor Family AT1G23380 61.579 9.29e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0526 - - lja:Lj2g3v1415210.1 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0526 16 3343137 3353735 Lal16g0526 16 3343137 3353735 ECH
Lal16g0526 16 3343137 3353735 Lal15g0475 15 3234291 3243148 LSH