Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0521 ATGGCATGGGTTTCCCTTGCAACCCTTCTCATGTTCCTCTTGGTACTCGTTCATTCCAAGCCTATTCCAACCTATCGTGGCCTTGGAAATAATGCATTTTATGACCTTCCAGATTATCAAAAGGGTCCTGAACAAGATAAACTAAATGGAGAACAAGTAAAAAATGTTAATGTTAATGGTACTCTCAGGGAAGGGTTCTATAGCCAGAGTTGCCCAAATGCAGAAAATATTGTGGCTGAAGAGCTTGCTCAGATTGCTAAGACAAATCCAAATGCAGTTCCTAACCTCCTTCGTCTTCAGTTCCATGATTGTTTCGTTGGTGGATGTGATGCCTCAATCTTGCTAGATGTTTTACCATCCGGTGAACAAGTAGAGAAATCTTCATTGCTCAATGGTTTACTCCTCAAGGGTACTGATATAATTGATGATATAAAGGCAAAGTTAGAAGAAGAATGCCCTCAAACAGTGTCATGTTCTGACATATTAGCATTTGCAACCAATGAAGCTATATCCCTAGCTGGTCTGCAACGTCAAGCTCCCCTTGGTGGCCGTAGAGACTCCATCATTTCCCTTGCAAATTTAGCAGAAGACAATAACCTTCCTTTGCCAAACTGGTCGGTGGATAAAATGTTAGCCACATTTGAAAAGAAAGGGTTCACAGCTGAAGAAATGGTAATATTATTAGGTGCACATTCTGTTGGTTCAGCTCATTGTGACATGTTCAATGAAAGGTTATACGACTTCAAAGGCACTCAAAAACCAGACCCTGCATTAGCTGCACCGTTTGTTGACGAACTCAGAAAAACATGCACTGCTCCAGGGACACCCCAGTATAGGAACCCACCAGTGAACTTTGACGAGACACCAACAGTACTTGACAACCTCTTCTTCAAGAACCTCGCTGAGAAACGTAAATCGTTGCTCATGACTGATGATGTTTTGCTAGATGATCCTAGAACTGCACCAACTGTGAAGAAAATGGCTGCTGAGCCTGAATTGTTTGCTAAAAGGTTTCCCGAGATGATGATTAAGTTGAGTTCTTTGAATGTTTTGACAGGGAATGATGGACAAGTTAGGATAACTTGTAGGTCCACTAACTAA 1101 0.416 MAWVSLATLLMFLLVLVHSKPIPTYRGLGNNAFYDLPDYQKGPEQDKLNGEQVKNVNVNGTLREGFYSQSCPNAENIVAEELAQIAKTNPNAVPNLLRLQFHDCFVGGCDASILLDVLPSGEQVEKSSLLNGLLLKGTDIIDDIKAKLEEECPQTVSCSDILAFATNEAISLAGLQRQAPLGGRRDSIISLANLAEDNNLPLPNWSVDKMLATFEKKGFTAEEMVILLGAHSVGSAHCDMFNERLYDFKGTQKPDPALAAPFVDELRKTCTAPGTPQYRNPPVNFDETPTVLDNLFFKNLAEKRKSLLMTDDVLLDDPRTAPTVKKMAAEPELFAKRFPEMMIKLSSLNVLTGNDGQVRITCRSTN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0521 366 PRINTS Haem peroxidase superfamily signature 93 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 PRINTS Haem peroxidase superfamily signature 156 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 PRINTS Haem peroxidase superfamily signature 285 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 SUPERFAMILY Heme-dependent peroxidases 62 366 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 Pfam Peroxidase 79 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 PANTHER PEROXIDASE 25-RELATED 48 364 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 Gene3D - 65 366 - -
Lal16g0521 366 PANTHER PEROXIDASE 48 364 - -
Lal16g0521 366 CDD secretory_peroxidase 62 365 IPR033905 GO:0004601|GO:0042744
Lal16g0521 366 ProSiteProfiles Plant heme peroxidase family profile. 61 366 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 Gene3D Peroxidase, domain 2 201 345 - -
Lal16g0521 366 ProSitePatterns Peroxidases active site signature. 93 104 IPR019794 GO:0004601
Lal16g0521 366 PRINTS Plant peroxidase signature 71 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 PRINTS Plant peroxidase signature 95 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 PRINTS Plant peroxidase signature 136 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 PRINTS Plant peroxidase signature 155 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 PRINTS Plant peroxidase signature 222 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 PRINTS Plant peroxidase signature 300 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 PRINTS Plant peroxidase signature 340 353 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0521 366 ProSitePatterns Peroxidases proximal heme-ligand signature. 223 233 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0521 Lal-Chr16 3309388 3311116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0521 62 366 Peroxidase AT3G03670 41.424 5.01e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0521 K00430 - gmx:100802856 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0521 16 3309388 3311116 Lal15g0469 15 3187805 3189279 LSH