Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0512 ATGCCAAGCAACGATAATTCAGCATTACGGGAAGCAAATGTTCCATTGTTGGAAGATTACATTGATCGTGAAAAAGAAAATGATAGTCTCTCTGGGAAAATTTGGAGTGAATCGAAGAAACTTTGGCAAGTAGCAGGTCCTTCAATTTTCAACCGTGTTGCGAATTATACTATGATTGTTATTACCCAAGCCTTTGTTGGCCACATAGGTGACCTTGAGTTGGCTGCTACCTCTTCTGCCATCAATGTCATTCTGGGCTTTGACATGGGTCTCATGTTGGGGATGTCAAGTGCCTTAGAAACACTGTGTGGGCAAGCTTTTGGTGGAAAAAAGTACTACATGTTAGGTGTTTACATGCAGCGTTCATGGATCATACTTTTCATTACTAGTGTGATACTTTTGCCTTGGTTTTTCTTTGCAACACCTATCTTAATCTTCTTTGGTCAGCCTCCAGAGATAGCTGAGCTTGCAGGGGTGGTTTCCAAGTGTCTAATACCAACTCACTTGGCTTTTGCATTTTTTTTCCCACTCCATTTTTTCTTACAAAGCCAGCTCAAAAATAAGGTTGTTGCTTGGGTGTCACTTGGGGCTCTTATTGTGCATGTATTCATTTCCTGGTTGGTTCTGTACAAGTTTCAGCTCGGAGTGATTGGTGTTATTGCTGCTGGAAATGTGTCTTGGTGGTTTATGGTGTTTGGATACTTTGGTTATGTTGTTTGGGGTAATTGCCCCTTAACTTGGAGTGGTTTTTCCTTGGAAGCTTTCTCTGGTCTTTGGGAGTTTGCCACACTCTCTGCTGCTTCAGGGGTCATGATCTGTGCAACCGTAAATATTTGGGAGTTGATGTTTCCTTTGGCATTCCTTACTGCAATTGGAGTAAGGGTTGCAAACGAGCTTGGAGCTGGGAATGGAAAAGGAGCCAAGTTTGCTACCATTGTGGCAGTGGTGACATCATTTATAATAAGCTTTTTCTTCTGGCTATTGATAATGATCTTTCGAACTAAACTTGGCTACATATTTTCTTCGACCGAAGCTGTTATTGAAGTGGTGAACAAGCTGTCACCCCTCTTAGGCGTCACAGTTCTACTCAACAGTGTTCAGCCAGTCCTGTCAGGGGTGGCTGTGGGATCAGGGTGGCAGAAATATGTGGCATATATAAACTTGGGTTCCTACTATGGTGTTGGGGTTCCGCTTGGCTATTTGTTGGGTTTTGTTTTTAATCTTAAAGTGCAGGGAATCTGGGCTGGTCTAATTTTTGGCGGAACAGCAGTTCAGACTTTGATACTAATCGCGATTACCATTCGATGTGACTGGGAAAAGGAGGCCGAGAAAGCATTGTTGCATTTGAGTAAATGGGAAGCTCCACATAAAAAAACTGAAGAATAA 1386 0.425 MPSNDNSALREANVPLLEDYIDREKENDSLSGKIWSESKKLWQVAGPSIFNRVANYTMIVITQAFVGHIGDLELAATSSAINVILGFDMGLMLGMSSALETLCGQAFGGKKYYMLGVYMQRSWIILFITSVILLPWFFFATPILIFFGQPPEIAELAGVVSKCLIPTHLAFAFFFPLHFFLQSQLKNKVVAWVSLGALIVHVFISWLVLYKFQLGVIGVIAAGNVSWWFMVFGYFGYVVWGNCPLTWSGFSLEAFSGLWEFATLSAASGVMICATVNIWELMFPLAFLTAIGVRVANELGAGNGKGAKFATIVAVVTSFIISFFFWLLIMIFRTKLGYIFSSTEAVIEVVNKLSPLLGVTVLLNSVQPVLSGVAVGSGWQKYVAYINLGSYYGVGVPLGYLLGFVFNLKVQGIWAGLIFGGTAVQTLILIAITIRCDWEKEAEKALLHLSKWEAPHKKTEE 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0512 461 PANTHER PROTEIN DETOXIFICATION 18 275 - -
Lal16g0512 461 PANTHER PROTEIN DETOXIFICATION 272 451 - -
Lal16g0512 461 CDD MATE_eukaryotic 37 444 IPR045069 GO:0042910|GO:1990961
Lal16g0512 461 PANTHER MULTIDRUG RESISTANCE PROTEIN 18 275 - -
Lal16g0512 461 PANTHER MULTIDRUG RESISTANCE PROTEIN 272 451 - -
Lal16g0512 461 Pfam MatE 47 207 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal16g0512 461 Pfam MatE 266 401 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0512 Lal-Chr16 3242713 3246086 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0512 K03327 - gmx:100805916 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0512 16 3242713 3246086 Lal15g0073 15 505350 509616 LSH