Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0490 ATGACTTTTTTGTCCTCCAAATATTTTAAACAAAATTCAAAAGAGAACAGTGGTTCACAACTATTCGATTGCCCTTACCATGGACCATATGAAAAATTCCGAATACTATTATTAACAGTAAATGTCCTACAACCACAAGCACAAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGGATATGAGTTTGATTTTGAAGAAATTGATTTTGGATCATTAAACGAAGATGAAGTAAAGAAATATAGGTTTGTAAACAATGATATTGCATATAATTTTTATAAGATGTATGGTATGAAGAAAGGATTTGACATTAGAAAATATCATACTCGTCGGGACAAGGATTGTGAAATTTTATGGCAATCATTTTTTTGTGATAGAGAGAGATTTAGGGATAAGAAAAATGAATTAGTTCGAAAAAAGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAACAAGAATGAAAATTCATATTGACAAGGAGAAATGTGATTGGTATGTGAGTTATTTTGTTGATGATCATAATCATGAATTGGTTGGTGAACATTATGGTGGGATGATAGCCTCAAACCGAAGTATGACAAAAATAGATGTCGCACAGATGAACGAGAAGTTGGTATTGGAACAGACAAAATTTTTTGTTCATTCGCTGGTCAATCTGGTGGATATCGAAAGATATATATATAATCAAATTCAAAGACAACGAAGAATAGGAAATGGTGACGCAGAATCAGCATTACAATACTTGAAGGAACAATCAAAATCAGATTCTGCAATGTATTGGAGACACAGTGTAGATGAAGAATTTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAACATTTTTTACTACTCAATTTTTGGAGATGTTCTAGTTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACAATATTTGATGCTGGTATTGTGTCTAACGAGACAGAGGAAACCTACGAAATTTCTTGGACTGCGTCACCACGTTGCGAGGGATTACATTCACAAATGGGGAAATATATAGAATCTGAGTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGAGGAACAATGAGGTGGTGGAAGATTTTAAATCTTCGTATGGTGATGAGTTGTTACACACTCCTTATCATAATTTAGAGGGTCATGATGCTTCCATATATACTAGAGTTGTTTTCAAAGAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAATCCTCAAGTCATGTCATATACAAGATTGAGAAGCATTATAATCCGAACAAGAAATGA 1365 0.3326 MTFLSSKYFKQNSKENSGSQLFDCPYHGPYEKFRILLLTVNVLQPQAQDEIDVSEDENINEGYEFDFEEIDFGSLNEDEVKKYRFVNNDIAYNFYKMYGMKKGFDIRKYHTRRDKDCEILWQSFFCDRERFRDKKNELVRKKAPRKETRCGCLTRMKIHIDKEKCDWYVSYFVDDHNHELVGEHYGGMIASNRSMTKIDVAQMNEKLVLEQTKFFVHSLVNLVDIERYIYNQIQRQRRIGNGDAESALQYLKEQSKSDSAMYWRHSVDEEFKLQQLFWADGCNIFYYSIFGDVLVFDATYGRNKYKFPVVIFSGVNHHKQTTIFDAGIVSNETEETYEISWTASPRCEGLHSQMGKYIESEYNVTEFLHHFQRCLSYMRNNEVVEDFKSSYGDELLHTPYHNLEGHDASIYTRVVFKEFREILLEAAKLRIISSQQSSSHVIYKIEKHYNPNKK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0490 454 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 82 338 IPR031052 GO:0006355
Lal16g0490 454 Pfam MULE transposase domain 293 342 IPR018289 -
Lal16g0490 454 PANTHER OS02G0262500 PROTEIN 82 338 - -
Lal16g0490 454 Pfam FAR1 DNA-binding domain 93 181 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0490 Lal-Chr16 3098539 3101226 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal16g0490 FAR1 2.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0490 - - lang:109327968 396.356