Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0463 ATGGGTGCTGGAGGACCTGATGATGATGACAATAGGTGGCCACCATGGTTGAAGCCACTGCTGAAAGAGACTTTTTTTGTTCAATGCAAGCAACATGCTGATTCTCACAAGAGTGAATGTAATATGTATTGCTTGGATTGTATGAATGGTGCTATCTGTTCTCTCTGCCTTACTCATCACAAGGACCATCGTGCTATTCAGATTAGGAGGTCCTCATACCATGATGTGATTAGGGTCAATGAGATTCAGAAGGTGTTGGACATCACTGGGGTACAGACCTACATTATCAACAGTGCAAGGGTTGTGTTCTTAAATGAGAGGCCTCAACCAAGGCCTGGGAAAGGTGTCACAAACACATGTGAAGTCTGTGAACGAAGCCTTTTTGATTCTTACCGGTTCTGTTCTCTTGGTTGCAAGATTGTTGGAACATCTAAGAATTTCCAGAAGAAGAAGCACATAGCAGCAATGACATCAGATTCTGAGGGTTCGTACTGTAGCAGCAGCAGCCATGGCAGGCACATGAACTCTAAGGTGCAGAGTTTCACACCATCTACACCACCACCAACATCAGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGACTAATCATAGAATATTAG 648 0.4429 MGAGGPDDDDNRWPPWLKPLLKETFFVQCKQHADSHKSECNMYCLDCMNGAICSLCLTHHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLFDSYRFCSLGCKIVGTSKNFQKKKHIAAMTSDSEGSYCSSSSHGRHMNSKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0463 215 MobiDBLite consensus disorder prediction 164 192 - -
Lal16g0463 215 Pfam PLATZ transcription factor 69 140 IPR006734 -
Lal16g0463 215 MobiDBLite consensus disorder prediction 164 204 - -
Lal16g0463 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 211 - -
Lal16g0463 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0463 Lal-Chr16 2868183 2870597 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lal16g0463 PLATZ 9.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0463 - - vra:106774881 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0463 16 2868183 2870597 Lal16g0463 16 2868183 2870597 ECH
Lal16g0463 16 2868183 2870597 Lal15g0407 15 2756520 2758985 LSH
Lal16g0463 16 2868183 2870597 Lal23g1121 23 12768713 12771232 LSH