Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0452 ATGGCACCTTCATTCGAACGTAGTACTCACACAGTTTGTGTCATGGACGCTTCAGGCCAATTGGGCTTCAGCCTGGTCCAAAGACTCCTCCACAGGGGCTACACCGTCCATGCCTCTGTTCAAAAACAAGGGGAAGAGATGCTTAATGGGATTTCTGCTGATCACAATAAGCTCAAGATTTTTCGATCAGATCCTTTTGATTATCATAGCATAATTGATGCACTCAGAGGCTGCTCTGGCTTGTTCTACTCATTTGAACCACCCCTTGACCAACCCGAGTATGATGAACACATGGCAGACGTGGAGGTTAGAGCAGCACACAACGTGCTTGAAGCTTGTGCTCAAACAGAAACCATAGATAAGGTTGTTTTCACATCCTCAGCAACAGCAGTGCTTTGGAGGGAGGATCGCAAAACCATGGACCTAGATTTGGATGAGAGACACTGGAGTGATGTCAATTTTTGTCGTAAATTCAAGTTATGGCATGGGATATCAAAGACACTATCAGAGAAAACAGCGTGGGCCTTAGCAATGGACCGTGGGGTTAATATGGTGTCCATCAACAAAGGCTTATTGATGGGTCATGATCTCTCCATCGATAACCCTTACTTGAGAGGAGCGGCTGAGATGTACGAGGATGGTGTGTTCGTGACCGTTGATTTGGGATTCTTGGTTGATGCTCACATATGTATCTACGAGGATGTTTCATCCCACGGTCGTTATTTGTGCTTCAATCATATCATCAACACACAAAACGACGCCGTTCTGCTCGCACGCCACTTGACCCCAAATGCTTCTTACTTACCTCACAGTGTTGACCATGACAAGAGTTTTATCAAACAGAGGATAAGCAATAAGAAGTTGAACAAATTGATGATGGACTTTGAGGCTTGA 894 0.4508 MAPSFERSTHTVCVMDASGQLGFSLVQRLLHRGYTVHASVQKQGEEMLNGISADHNKLKIFRSDPFDYHSIIDALRGCSGLFYSFEPPLDQPEYDEHMADVEVRAAHNVLEACAQTETIDKVVFTSSATAVLWREDRKTMDLDLDERHWSDVNFCRKFKLWHGISKTLSEKTAWALAMDRGVNMVSINKGLLMGHDLSIDNPYLRGAAEMYEDGVFVTVDLGFLVDAHICIYEDVSSHGRYLCFNHIINTQNDAVLLARHLTPNASYLPHSVDHDKSFIKQRISNKKLNKLMMDFEA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0452 297 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 6 296 - -
Lal16g0452 297 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 296 - -
Lal16g0452 297 Pfam NAD(P)H-binding 17 130 IPR016040 -
Lal16g0452 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 263 IPR036291 -
Lal16g0452 297 Gene3D - 4 297 - -
Lal16g0452 297 CDD FR_SDR_e 12 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0452 Lal-Chr16 2811140 2813526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0452 12 295 Miscellaneous Gene Families AT5G19440 31.208 3.64e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0452 - - gmx:100793329 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0452 16 2811140 2813526 Lal16g0452 16 2811140 2813526 ECH
Lal16g0452 16 2811140 2813526 Lal15g0402 15 2730566 2733675 LSH