Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0441 ATGGAGCTATTCCCAGCACAACCAGATTTGTCCTTACAAATCAGCCCTCCAAATACAAAACCGACATCAAGTTGGAGGAGAAGTACAACAGATGAAGAAGTGGATTTGGGGTTTTGGAATAGAGCTTTGGACTCTAGAAAGTTCTTATCATCATCAATGTCCAAAGCTGATGCCATATCTTTTGACCTATCCCTCTCAAATCCAACAAAACCTTCTTCAAACACCAACCTCATTCACCCATTCCAAAACACCACTAATGCAAACAACAACAGCAGTAACCCTTTCCAATCATTCCATCAAAATCACTACTTTCACCAACAGCAGCAGCGTCCACTACTCTTCCAGCCACAGCAACAACAACAGCACCAAAGCCTAAGCCAAGAGCTTGGTTTTTTGAGACCCATCAGAGGAATCCCAGTGTACCAAAACCCTCCTCCTACTATGACATTCCCCCAACTTCAACATCAAAAAAATCATCTTCAAGATGCTTCTTCCACTACCCCTTCACCTATTTCCCACACAGCTACTATAACCCCTTTTCATCATTCTCAAGCTTTGATGCGATCAAGGTTCTTATCGCGCTTTCCTGCGAAGCGAAGCATGAGAGCTCCTCGGATGCGTTGGACAACTACACTCCATGCTCGCTTTGTTCATGCCGTTGAGCTCTTAGGTGGTCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTTAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACGGACAGAGCAGCGGCTTCATCAGGGCAATCTGATGTATACGATAATGGATCATCTGGAGATAACTCTGATGAATTAATGTTTGACATTAACTCTTCAAGAAGGTCTGATCTACCCATTAAGCAGGGAAGGATAAGTGTTAATCAAGATAATGAATTTCATGGGCTTTGGAGTAACTCTTCCAGGGAAGCTTGGTTGAACGGAAAGCCAAAGGCTGATTCTGTTAGAAACGTGCCTTCTCTTGAGAAGGATGTGGATCCAAAGTGCCTAAGCTATGAGAGAATATCAGATGGAAGCTCATCCTCAAACCTTTCAGGAACAAGTCCTAAAAAGTGTAATTTGGATTTGGAATTCACCTTGGGCCGGCCACTTTGA 1155 0.4338 MELFPAQPDLSLQISPPNTKPTSSWRRSTTDEEVDLGFWNRALDSRKFLSSSMSKADAISFDLSLSNPTKPSSNTNLIHPFQNTTNANNNSSNPFQSFHQNHYFHQQQQRPLLFQPQQQQQHQSLSQELGFLRPIRGIPVYQNPPPTMTFPQLQHQKNHLQDASSTTPSPISHTATITPFHHSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDNSDELMFDINSSRRSDLPIKQGRISVNQDNEFHGLWSNSSREAWLNGKPKADSVRNVPSLEKDVDPKCLSYERISDGSSSSNLSGTSPKKCNLDLEFTLGRPL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0441 384 MobiDBLite consensus disorder prediction 262 286 - -
Lal16g0441 384 MobiDBLite consensus disorder prediction 1 30 - -
Lal16g0441 384 Pfam Myb-like DNA-binding domain 205 256 IPR001005 -
Lal16g0441 384 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 383 - -
Lal16g0441 384 MobiDBLite consensus disorder prediction 11 25 - -
Lal16g0441 384 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 383 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lal16g0441 384 SUPERFAMILY Homeodomain-like 201 257 IPR009057 -
Lal16g0441 384 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 204 257 IPR006447 GO:0003677
Lal16g0441 384 Gene3D - 203 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0441 Lal-Chr16 2690792 2696173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0441 1 383 G2-like Transcription Factor Family AT4G17695 39.506 5.03e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal16g0441 Myb_DNA-binding 1.8e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0441 - - aprc:113868756 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0441 16 2690792 2696173 Lal16g0441 16 2690792 2696173 ECH